Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20godetiae_20[genbank_20GCA_5F001663355.1_202016-06-
15] 1,819 sequences; 35,034,269 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq1170 179 4e-40
>seq1170
Length=97779
Score = 179 bits (198), Expect = 4e-40
Identities = 1049/1653 (63%), Gaps = 77/1653 (5%)
Strand=Plus/Plus
Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTC 75271
|| ||| ||||| ||||||| |||||| |||| ||| || || || |||| |||
Sbjct 59309 CCGCAGCACATGATCATGCGTGTCGCAGTCGGTATCTGGGGCGACGATGTTGAGCGCGTC 59368
Query 75272 TTGGAGACATACGACAAGATGTCC--CAAGGTATGTTCATTCACGCAACACCAACCCTCT 75329
| ||||| ||| || |||||| |||| | | ||| ||||| | || || || |
Sbjct 59369 ATCGAGACCTACAACCTCATGTCCAGCAAGTTCT--TCACACACGCCTCCCCCACACTTT 59426
Query 75330 TCAATGCTGGTACACCA-AGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAG 75388
||||||| ||||| || || | ||| |||| |||||||| ||| || |||||
Sbjct 59427 TCAATGCCGGTACCCCTCAGTGC-CAGCTGTCTTCATGCTTCCTCGTCGACATGAAGGAA 59485
Query 75389 GACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCT 75448
||||| || | |||||||| | || || | | || || ||||| ||| ||||
Sbjct 59486 GACTCCATTGAGGGTATCTACGACACCCTCAAGACCTGCGCCATGATCTCCAAGATGGCT 59545
Query 75449 GGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACA 75508
|| || ||||| | || || | | | |||| | || ||| || ||
Sbjct 59546 GGTGGCATTGGCCTCAACGCTCACCGTATCCGTGCCACTGGCTCCTACATTGCCGGCACC 59605
Query 75509 AATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTAT 75568
|| || || | || | ||||| |||||||| || || ||| ||| || |||||
Sbjct 59606 AACGGCACCTCTAACGGCGTCATTCCCATGCTTCGTGTCTTCAACAACACTGCTCGCTAC 59665
Query 75569 GTAAATCAAGCGGG------GCGTCGCAAGGGGTCCATCGCGGTCTACTTGGAACCATGG 75622
|| | || | || ||||| || || |||| ||||| | || || |||
Sbjct 59666 GTCGACCAGGGTGGCAACAAGCGTCCT---GGTGCCTTCGCCATCTACCTTGAGCCCTGG 59722
Query 75623 CATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGG 75682
|| |||||| || | |||||| | || || || ||||| || | || |||| || |
Sbjct 59723 CACGCCGATGTCTTCGAGTTCATGGACTTGCGCAAGAACCACGGCAAGGAGGAGG-TCCG 59781
Query 75683 TGTA-GAGATCTCTTTTCATC--CCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAG 75739
|| | || || |||| || ||| ||||| || || || ||||||||| | || |||
Sbjct 59782 TGCCCGTGACCT--TTTCCTCGCCCTCTGGATCCCCGATCTGTTCATGAAGAGAGTCGAG 59839
Query 75740 GAGGGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTG 75799
|| | ||||| | || | || || || || || || || | |||
Sbjct 59840 AAGAACGCCGAATGGACCCTCATGTGCCCCAACGAGTGCCCCGGCCTGGCTGACTGCTAC 59899
Query 75800 GGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAA---GAGG---AGGGTAGAGCCAAT 75853
|| ||||||||||| ||| | ||| |||||| || |||| ||||| | |||
Sbjct 59900 GGCGAGGAGTTTGAGGCCTTGTACGAAAAGTACGAGCGCGAGGGCAAGGGTCG---CAA- 59955
Query 75854 GCGACTGTACCAGCCGCCGATG-TTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGG 75912
||| | | || | | || | ||||| | || || ||| | | ||||| ||||| ||
Sbjct 59956 --GACCAT-CAAGGCCCAGAAGCTTTGGTACGCCATCCTCGAGGCTCAGACTGAGACCGG 60012
Query 75913 AACACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGG 75972
| || | ||||||||||||||||| ||| ||||| ||||||||||| | ||
Sbjct 60013 CAACCCCTTCATGCTTTACAAGGATGCCGCGAACCGCAAGAGCAACCAAAAGAACCTCGG 60072
Query 75973 AACAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGAC 76032
||| ||| ||||| || || ||||| || ||| | |||||| | ||||||
Sbjct 60073 AACCATCCGCAGCTCCAACCTCTGCACTGAGATTATTGAGTACTGCGCCCCCGATGAGGT 60132
Query 76033 GGCTGTTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGT------CAATGAAGAGAC 76086
||||| ||||| ||||| || | ||||| || | | || |||||| |
Sbjct 60133 CGCTGTCTGCAACTTGGCCTCTCTTGCCCTGCCTACCTTCGTTGACTACAATGAGG---- 60188
Query 76087 TCGCACTTTTGATTATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAA 76146
| || |||| | || ||||| || |||| || | ||| || || ||
Sbjct 60189 --GTGTTTACGATTTCCAGAAGCTTCACGAGGTCACTCAGGTCGTTGTTCGCAACCTGAA 60246
Query 76147 CCGAGTCATTGACAGAAATTTTTATCCCGT---TGAGACTGCGCGAAAGTCTAATATGCG 76203
| ||||||| || || ||||| |||| || ||| | || || |||||
Sbjct 60247 CAAGATCATTGATGTCAACCACTACCCCGTTCCTGAGGCT-CGCAACAG--CAACATGCG 60303
Query 76204 ACACAGACCTATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATTTTGTGCCGCTA 76263
||| | || || ||| | ||||| || ||||| || |||| || | |||| |
Sbjct 60304 TCACCGCCCCATCGGTCTTGGTGTCCAGGGTCTTGCTGATGCCTTCCTCGCCCTCCGC-A 60362
Query 76264 CGCATTT-GATTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATC 76322
|| ||| || || ||| || || | ||| || ||||| ||||| || |
Sbjct 60363 TGCCTTTCGAGTCTCCTGAGGCTCGCGATCTCAATAAGAAGATTTTTGAGACCATCTACC 60422
Query 76323 ACGCATCCCTG--GAGGCGAGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATT 76380
|||| | ||| | | || | || |||| | | ||| |||| || |
Sbjct 60423 ACGCCGCTCTGACCATGTCCGT--TCAACTGGCCAGGGAGGAGGGTACCTACTCCACGTA 60480
Query 76381 TGAGGGTTCTCCCGCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAA 76440
||||| || || ||||| || | ||||||| || |||| |||| || || ||
Sbjct 60481 CGAGGGCTCCCCTATCTCCCAGGGTATCCTTCAGTACGACATGT-GGAATGTCAAGCC-C 60538
Query 76441 GCT--CAACTACGACTGGGATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAAC 76498
|| | || |||||||| ||| ||||| | ||||||||| | ||| |||| |||
Sbjct 60539 TCTGACCTCTGGGACTGGGACTCTCTGAAGGAGCAAATCAAGGAGCACGGTGTTCGCAAC 60598
Query 76499 AGTCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAA 76558
||| | | | || || ||||| || |||||||| | || |||||||| || || ||
Sbjct 60599 AGTTTGCTTGTTGCTCCCATGCCTACTGCCTCCACTTCCCAGATCTTGGGCAACAACGAG 60658
Query 76559 TGCTTTGAACCATACACAACAAACATCTACCTGAGAAGAACCCTCGCAGGTGAGTTTGTC 76618
||||| || || ||||| | |||||||||| | | | ||||| || |||||
Sbjct 60659 TGCTTCGAGCCCTACACCTCCAACATCTACCAGCGCCGTGTTCTCGCCGGCGAGTTCCAG 60718
Query 76619 ATTGTCAACAAGCACCTCGTCAATGACCTCAAGAAGATTGGTCTCTGGTCCAAGGATATG 76678
|||||||| || | || || || | || || | |||||| | | |||
Sbjct 60719 GTTGTCAACCCCTGGCTGCTGAAGGATCTTGTCGACATGGGCTTGTGGTCCGATGCCATG 60778
Query 76679 AAGGA---TCTCAT-GGTGAAAGCGGGTGGTTCCATTCAAAATATCTCAGATATCCCAGA 76734
||| | | |||| | || | | |||||| |||| || ||| | | ||||| |
Sbjct 60779 AAGAACCGTATCATCGCCGAGAAC----GGTTCCGTTCAGAACATCCCTAACATCCCCGC 60834
Query 76735 TGATATCAAGAATCTCTACCGCACAGTGTGGGAAAT---CAAGATGAAAGATGTCATTGA 76791
|| ||||| ||| ||| || || |||||||| | || | | || || |
Sbjct 60835 CGAGGTCAAGGCTCTGTACAAGACCGTCTGGGAAATCTCCCAGCGCACCGTTG---TTCA 60891
Query 76792 CATGGCCGCAGATCGTGGTCGCTTCATTGATCA 76824
||||| || ||||||||| ||||||||| ||
Sbjct 60892 GATGGCTGCCGATCGTGGTGCCTTCATTGACCA 60924
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596556035498720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |