Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20godetiae_20[genbank_20GCA_5F001663355.1_202016-06-
15] 1,819 sequences; 35,034,269 total letters
Query= NC_020864.1
Length=205622
Score E
Sequences producing significant alignments: (Bits) Value
seq1295 367 2e-96
seq866 192 8e-44
seq1170 105 9e-18
seq319 100 4e-16
seq607 96.9 5e-15
>seq1295
Length=19304
Score = 367 bits (406), Expect = 2e-96
Identities = 786/1171 (67%), Gaps = 5/1171 (0%)
Strand=Plus/Minus
Query 195711 CAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTG 195770
|||| || ||||| || || ||||||| || || || || || || || |||||||| |
Sbjct 14482 CAGTCGTCACTGTCCCCGCCTACTTCAACGACTCCCAGCGTCAAGCTACCAAGGACGCAG 14423
Query 195771 CTGCTATTGCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTG 195830
| ||||| || || ||| ||| | || ||||| || || || || ||||| ||||
Sbjct 14422 GTCTCATTGCCGGCCTCAACGTCCTTCGTATCATCAACGAGCCTACCGCCGCTGCCATTG 14363
Query 195831 CTTATGGTCTGGACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTG 195890
| || ||||| |||||||| || | || || || | ||||| ||||| ||||
Sbjct 14362 CCTACGGTCTTGACAAGAAGGCCGAGGGCGAGCGCAACGTTCTCATCTTCGATCTTGGTG 14303
Query 195891 GTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTA 195950
||||||| || ||||| || ||||| | ||||| | || || ||||| || ||| | |
Sbjct 14302 GTGGTACTTTCGATGTGTCTCTTCTGACCATTGAGGAGGGCATTTTCGAGGTCAAGTCCA 14243
Query 195951 CTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTCCGTCA-TTTG 196009
| |||||||| ||||| | |||||||| || || || ||||| || || || |
Sbjct 14242 CCGCTGGTGACACTCACTTGGGTGGTGAGGACTTTGACAACCGTCTCGTCAACCACTTCG 14183
Query 196010 TCTGATGAGTTCCGTCGAAAGAATAAGAAAGATATTTCTGGAAATCCTAGGGCTCTTCGT 196069
|| | |||||| || ||| | ||||| || | || || | | || || ||
Sbjct 14182 TC-AACGAGTTCAAGCGCAAGCACAAGAAGGACCTGTCCTCCAACGCCCGCGCCCTGCGC 14124
Query 196070 CGGCTTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGGCTCAAACAATG 196129
|| ||| | || || || || |||||||| || ||||| || || | || || ||
Sbjct 14123 CGTCTTCGCACCGCTTGCGAGCGTGCCAAGCGCACTCTGTCCTCGTCTGCCCAGACCTCC 14064
Query 196130 GTTGAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACCCGTGCACGT 196189
| ||||| || || |||| || || || |||||||| || | || |||||||| ||
Sbjct 14063 ATCGAGATCGACTCCCTGTTCGAGGGTATCGACTTCTACACCTCCATCACCCGTGCTCGC 14004
Query 196190 TTTGAAGAGTTAAACTCTGATTTGTTTAGGAAGTGTATGGAACCTGTTGAACAAGTACTT 196249
|| || ||| | | || |||| | || | || || || | || |||
Sbjct 14003 TTCGAGGAGCTTTGCCAGGACCTGTTCCGCTCTACCATCCAGCCCGTCGACCGTGTCCTT 13944
Query 196250 CGTGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCAACC 196309
||||| ||| | || ||||| |||| | || || ||||| || ||||| || |||
Sbjct 13943 ACCGACGCCAAGGTCGACAAGTCCCAGGTCCACGAGATCGTCCTGGTCGGAGGTTCCACC 13884
Query 196310 CGTATTCCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAATAAAGATTTAAACAAA 196369
||||| || | || || | | || || |||||| || || |||||
Sbjct 13883 CGTATCCCCCGTGTCCAGAAGCTCATCTCCGACTACTTCAACGGCAAGGAGCCCAACAAG 13824
Query 196370 ACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTCTCA 196429
| |||||||| ||||| || ||||| || ||||| || || ||||| || ||||| ||
Sbjct 13823 TCCATCAACCCCGATGAGGCTGTTGCCTACGGTGCCGCTGTCCAGGCCGCCATTCTGTCC 13764
Query 196430 GGTGTT---GACAATAATAACGTCCAAGATCTTCTGCTACTTGATGTTGCACCCGTATCC 196486
|||| | | || | | | | || | || || || || || || || | |||
Sbjct 13763 GGTGATACCTCCTCCAAGAGCACCAACGAGATCCTTCTTCTCGACGTCGCTCCTCTGTCC 13704
Query 196487 CTGGGTCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATAGGAACACAACTATT 196546
|| ||| |||| || || ||||| | ||||| || | ||| | ||||| || ||
Sbjct 13703 CTCGGTATTGAGACTGCTGGTGGCATGATGACCAAGCTCATTCCCCGCAACACCACCATC 13644
Query 196547 CCGACTAAGAAGGAACAAGTCTTTTCAACGTATTCCGATAATCAACCAGGTGTTCATATT 196606
|| || |||||| | ||||| || || | || || || || || ||||| | ||
Sbjct 13643 CCTACCAAGAAGTCCGAGGTCTTCTCCACCTTCTCTGACAACCAGCCCGGTGTCCTCATC 13584
Query 196607 CAAGTATATGAAGGAGAACGCTCCCGTGCAAAGGATAACCATCTACTTGGAACTTTCGAT 196666
|| || || || || || ||| || | ||||| ||| | || || || | |||||
Sbjct 13583 CAGGTCTACGAGGGTGAGCGCCAGCGCACCAAGGACAACAACCTTCTCGGCAAGTTCGAG 13524
Query 196667 TTGACGGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGCTTCGATATA 196726
| || || ||||| | || ||| | |||||||| |||||| | || |||||| |
Sbjct 13523 CTTACCGGCATTCCCCCCGCCCCCCGTGGTGTTCCCCAGATTGAGGTCACCTTCGACCTT 13464
Query 196727 GACGCAAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGCAAATCTGAAAAG 196786
||||| || ||||| | |||||| | || | || |||| | | ||||| || | |||
Sbjct 13463 GACGCCAACGGAATCATGAACGTCTCCGCCGTCGAGAAGGGTACCGGCAAGTCCAACAAG 13404
Query 196787 ATTGTGATTACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATTGAACGTATGGTTCAA 196846
||||| || ||||| |||||||| || |||||||||||||| ||||| || ||| ||
Sbjct 13403 ATTGTCATCACCAACGACAAGGGCCGCCTTTCTAAGGAGGACATTGAGCGCATGCTTGCT 13344
Query 196847 GATGCGGAAAAGTACAGGGAAGAAGACGAGG 196877
|| || || |||| || ||| || || ||||
Sbjct 13343 GAGGCCGAGAAGTTCAAGGATGAGGATGAGG 13313
>seq866
Length=7889
Score = 192 bits (212), Expect = 8e-44
Identities = 166/206 (81%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 171884 TTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAATCGATAACATCAAAG 171943
|||| || || || ||||| |||||||| ||||| || || || ||||| ||| ||||
Sbjct 2153 TTACCGGCAAGACCATCACTCTCGAGGTCGAGTCATCCGATACCATCGACAACGTCAAGT 2212
Query 171944 CCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGTA 172003
||||||||||||| ||||| |||||||| ||||||||||| || || ||||| ||||| |
Sbjct 2213 CCAAGATTCAAGACAAGGAGGGCATTCCCCCCGATCAGCAGCGTCTCATTTTCGCTGGCA 2272
Query 172004 AACAGCTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAAGGAGTCTACTCTAC 172063
|||||||||| || || || |||||| | || |||||| | || ||||||||||| || |
Sbjct 2273 AACAGCTTGAGGACGGCCGCACCCTCTCCGACTACAACATCCAGAAGGAGTCTACCCTTC 2332
Query 172064 ACCTTGTTCTAAGGCTTCGGGGTGGT 172089
|| | ||||| | ||||| ||||||
Sbjct 2333 ACTTGGTTCTCCGCCTTCGTGGTGGT 2358
Score = 168 bits (186), Expect = 9e-37
Identities = 177/233 (76%), Gaps = 0/233 (0%)
Strand=Plus/Plus
Query 171857 GTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGT 171916
|| ||||||| ||||| ||||| || |||||||| || || ||||| ||||||||||| |
Sbjct 2640 GTGGTATGCAGATCTTCGTGAAGACTCTTACTGGCAAGACAATCACGCTCGAGGTTGAAT 2699
Query 171917 CGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCG 171976
| |||||||| || || ||| | || | ||||| ||||||||||| || || || ||||
Sbjct 2700 CTTCAGACACCATTGACAACGTTAAGTCGAAGATCCAAGATAAGGAGGGTATCCCCCCCG 2759
Query 171977 ATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATT 172036
| ||||| || | || || || || || |||||||| || || || || | | || |
Sbjct 2760 ACCAGCAGCGCTTGATCTTCGCCGGAAAGCAGCTTGAGGACGGTCGCACGTTGTCGGACT 2819
Query 172037 ACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089
||||| | || ||||||||||| || || ||||| || | || || ||||||
Sbjct 2820 ACAACATCCAGAAGGAGTCTACCCTGCATCTTGTCCTCCGTCTGCGTGGTGGT 2872
>seq1170
Length=97779
Score = 105 bits (116), Expect = 9e-18
Identities = 464/720 (64%), Gaps = 27/720 (4%)
Strand=Plus/Plus
Query 78050 CACGCAACACCTACTTTGTTTAATGCAGGTACTCCCC-GTCCACAGATGTCATCTTGTTT 78108
||||| | || || | || ||||| ||||| || | || | ||| |||| || || ||
Sbjct 59408 CACGCCTCCCCCACACTTTTCAATGCCGGTACCCCTCAGTGC-CAGCTGTCTTCATGCTT 59466
Query 78109 CCTACTTGCAAATAAGGAGGACTCTATTAATGGTATATACGGGACTCTCACAGAG-TGTG 78167
||| | | | ||||| ||||| ||| | ||||| |||| || |||| ||| || |
Sbjct 59467 CCTCGTCGACATGAAGGAAGACTCCATTGAGGGTATCTACGACACCCTCA-AGACCTGCG 59525
Query 78168 CTCAGATTTCTAAGTGGGCTGGTGGTATAGGTCTTCATATTCACGATGTTCGTGCAAACA 78227
| ||| || ||| ||||||||| || || || | |||| | | ||||| |
Sbjct 59526 CCATGATCTCCAAGATGGCTGGTGGCATTGGCCTCAACGCTCACCGTATCCGTGCCACTG 59585
Query 78228 AGTCCAGGATTAGAGGAACTAATGGTCAGTCTGATGGAATTATTCCTATGCTTAGGGTAT 78287
||| ||| || || || || ||| | || | ||||| |||||| | || |
Sbjct 59586 GCTCCTACATTGCCGGCACCAACGGCACCTCTAACGGCGTCATTCCCATGCTTCGTGTCT 59645
Query 78288 TCAATGCTACAGCACGCTATGTCAACCAAGCGGGTCGTAGGAAGGG-----GT-CATTCG 78341
|||| || || ||||| ||| |||| |||| | | ||| | || | ||||
Sbjct 59646 TCAACAACACTGCTCGCTACGTCGACCA---GGGTGGCAACAAGCGTCCTGGTGCCTTCG 59702
Query 78342 CTATGTACCTTGAACCTTGGCACGCCGATGTAATGGATTTTTTGGAACTTCGTCTCAACC 78401
| || |||||||| || |||||||||||||| | || || |||| | || ||||
Sbjct 59703 CCATCTACCTTGAGCCCTGGCACGCCGATGTCTTCGAGTTCATGGACTTGCGCAAGAACC 59762
Query 78402 AGGGTGACGAGGAAGCTCGATGCAGGGATTTATTCACTGCTATGTGGATTCCGGATCTTT 78461
| || | ||||| | || | | || | ||| || | ||||| || ||||| |
Sbjct 59763 ACGGCAAGGAGGAGGTCCGTGCCCGTGACCTTTTCCTCGCCCTCTGGATCCCCGATCTGT 59822
Query 78462 TTATGAAGAGAGTTGAGGAAGGA-GGTAAATGGTCTCTTTTCTGTCCAGATAAGACTAAG 78520
| ||||||||||| || |||| | | ||||| | || | || || | ||
Sbjct 59823 TCATGAAGAGAGTCGA-GAAGAACGCCGAATGGACCCTCATGTGCCCCAACGAGTGCCCC 59881
Query 78521 GGTCTTTCAGATGTATACGGGGAAGAATTCGAAAAATTGTACACTAAATACGA-----AG 78575
|| || | || ||||| || || || || |||||| || ||||| ||
Sbjct 59882 GGCCTGGCTGACTGCTACGGCGAGGAGTTTGAGGCCTTGTACGAAAAGTACGAGCGCGAG 59941
Query 78576 AGGAAGGTCTCGCTATTAAGACAATTGATGCATCTGAA-CTATGGAAAGCTATTATCAAA 78634
| |||| |||| ||||| || | || | ||| || ||| | || || || |
Sbjct 59942 GGCAAGG-GTCGC----AAGACCATCAAGGC-CCAGAAGCTTTGGTACGCCATCCTCGAG 59995
Query 78635 AGTCAAACAGAGACCGGCACCCCGTATATGCTATACAAAGACAGCTGTAACAGAAAGTCT 78694
||| || |||||||||| ||| | ||||| ||||| || | ||| | |||
Sbjct 59996 GCTCAGACTGAGACCGGCAACCCCTTCATGCTTTACAAGGATGCCGCGAACCGCAAGAGC 60055
Query 78695 AACCAAAAGAACCTAGGTGTCATCAAAAGCTCTAACCTTTGCACAGAAATTCTGGAATAC 78754
|||||||||||||| || |||| ||||| ||||| ||||| || ||| | || |||
Sbjct 60056 AACCAAAAGAACCTCGGAACCATCCGCAGCTCCAACCTCTGCACTGAGATTATTGAGTAC 60115
>seq319
Length=46287
Score = 100 bits (110), Expect = 4e-16
Identities = 238/356 (67%), Gaps = 3/356 (1%)
Strand=Plus/Minus
Query 195632 CCCGAAGAAATTTCGTCTATGGTGTTGATTAAGATGAAGGAGACTGCGGAATCTTTCATG 195691
||||| || |||| | ||| | ||| |||||||||||| || || | | |
Sbjct 2376 CCCGAGGAGGTTTCCGCCATGATCTTGGGCAAGATGAAGGAGGTCGCCGAGGCCTATCTT 2317
Query 195692 GGTAAAACTGTGAAAGATGCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGA 195751
|| || | |||| | || || || ||||| || || ||||||| || || ||
Sbjct 2316 GGCAAGAAGGTGACCCACGCCGTCGTCACTGTCCCCGCCTACTTCAACGACAACCAGCGC 2257
Query 195752 CAGGCGACAAAGGACGCTGCTGCTATTGCGGGTCTAAACTGTCTTAGAATTATCAATGAA 195811
||||| || ||||| || | || ||||| || || ||| ||| | || |||| ||
Sbjct 2256 CAGGCCACCAAGGATGCCGGTGTCATTGCCGGACTTAACGTTCTCCGCGTTGTCAACGAG 2197
Query 195812 CCAACAGCGGCTGCAATTGCTTATGGTCTGGACAAGAACAAGGACGAAGATAAAAATGTA 195871
|| || || || || || || || ||||| ||||||| | | | || | | || ||
Sbjct 2196 CCCACCGCCGCCGCTATCGCCTACGGTCTTGACAAGACCGACGGTGA-GCGCCAGAT-TA 2139
Query 195872 TTGATCTTTGATCTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGT 195931
| | ||| || || ||||||||||| || ||||| || ||||| || || ||
Sbjct 2138 TCG-TCTACGACCTTGGTGGTGGTACTTTCGATGTTTCTCTTCTGTCCATCGACCAGGGC 2080
Query 195932 ATATTCGAAGTAAAGGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGA 195987
| ||||| || |||||| || ||||| || || | |||||||| ||||||||
Sbjct 2079 GTCTTCGAGGTCCTGGCTACCGCCGGTGACACCCACTTGGGTGGTGAGGATTTCGA 2024
>seq607
Length=5268
Score = 96.9 bits (106), Expect = 5e-15
Identities = 273/405 (67%), Gaps = 21/405 (5%)
Strand=Plus/Minus
Query 198549 ATCCCACGTGGTGCTCTTCTCGCCGGTGCCCCGGGTACTGGTAAAACCCTTCTAGCTCGT 198608
|| || |||||||| | |||||||| | || || || ||||| || | || ||
Sbjct 3530 ATTCCTCGTGGTGCCATCCTCGCCGGACCTCCTGGAACCGGTAAGACGTTGCTTGCCAAG 3471
Query 198609 GCTATCGCGGGTGAATCGAGTGTCCCCTTTCTTCAGTGCTCCGCGG---CGAGTTTCATC 198665
|| | ||| || || || |||| ||||| |||||| | || | || |||||| | ||
Sbjct 3470 GCCACCGCTGGCGAGTCTGGTGTGCCCTT-CTTCAGCG-TCAGTGGTTCCGAGTT-CGTC 3414
Query 198666 GAGATGTTCGTTGGTGTTGGTGCTAAGCGCGTCCGGGAACTCTTTGAGCAAGCACGTGAA 198725
|||||||| || ||||||||| || | || || || | |||| | || || |
Sbjct 3413 GAGATGTTTGTCGGTGTTGGTCCTTCAAGAGTGCGAGACTTGTTTGCAAACGCCCGCAAG 3354
Query 198726 AATCAACCATGTATCATCTTCATTGATGAGATTGACGCTGTTGGT--AAGAAG-CGTGGT 198782
| | || |||||||||||||||||||| || ||||| ||||| | ||| | |
Sbjct 3353 AGTGCCCCCTGTATCATCTTCATTGATGAAATCGACGCCATTGGTCGATCAAGACAGGAA 3294
Query 198783 GGAACTACTACA--CCTGGTAATGATGAGCGTG-AGCAGACGATTAACCAGCTTCTCACT 198839
|||| || || || ||||||||||| | |||| || | |||||| | | ||
Sbjct 3293 GGAA--ACCGCATGGGCGGCAATGATGAGCGCGAAGCA-ACTCTGAACCAGATCTTGACA 3237
Query 198840 GAGATGGATGGTTT---TGACAATGAGACTGGTATCGTGGTGATTGCTGCTACAAATAGG 198896
|||||||| ||||| | | | ||| | || |||| || | || | || || ||
Sbjct 3236 GAGATGGACGGTTTCAATACCCAAGAG-CAGG--TCGTTGTCCTCGCGGGCACCAACAGA 3180
Query 198897 ATTGATATCCTAGATGATGCACTGCTTCGTCCCGGTCGATTCGAC 198941
||||| || || | || ||| | ||||||||||| ||||||
Sbjct 3179 GCCGATATTCTTGACAAGGCGCTGATGCGTCCCGGTCGTTTCGAC 3135
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 657847441853680
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