Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20godetiae_20[genbank_20GCA_5F001663355.1_202016-06-
15] 1,819 sequences; 35,034,269 total letters
Query= NC_024625.1
Length=151109
Score E
Sequences producing significant alignments: (Bits) Value
seq1170 329 3e-85
seq766 114 1e-20
seq866 111 2e-19
>seq1170
Length=97779
Score = 329 bits (364), Expect = 3e-85
Identities = 1016/1549 (66%), Gaps = 61/1549 (4%)
Strand=Plus/Minus
Query 148260 TTCACCACCTGAAACTCGCCGGCGAGCACGCGCCGCAGATACACGTTGCTCGTAAACGGT 148319
|| || ||||| |||||||||||||| || || ||| | || | |||| || | ||
Sbjct 60726 TTGACAACCTGGAACTCGCCGGCGAGAACACGGCGCTGGTAGATGTTGGAGGTGTAGGGC 60667
Query 148320 TCAAACGACTCGTTGTTGCCCAAAATCTGCGCGGTCGTTGCCGTGGGCATGTACGCTACC 148379
|| || |||||||||||||||| ||||| | || | || || |||||| || ||
Sbjct 60666 TCGAAGCACTCGTTGTTGCCCAAGATCTGGGAAGTGGAGGCAGTAGGCATGGGAGCAACA 60607
Query 148380 AGCAGCGAGTTGCGCAAACCGCGATTTTTTATTTTGCGCTTCAGAGCCGCCCAGTCCCAG 148439
|||| |||||| | |||| | | || |||| |||||||| |||||||||||
Sbjct 60606 AGCAAACTGTTGCGAACACCGTGCTCCTTGATTTGCTCCTTCAGAGAGTCCCAGTCCCAG 60547
Query 148440 AGCGGCGACGGTGTCACGTTCCACATGTCGTACTGCAGAATGCCGCGGCTAGCGGGGCTG 148499
|| || || | || ||||||||||||||||| || || || || ||| |
Sbjct 60546 AGGTCAGAGGGCTTGACATTCCACATGTCGTACTGAAGGATACCCTGGGAGATAGGGGAG 60487
Query 148500 CCCTCGTACGAGCTGTACGGTCCGTGCGCCGCCGCCAGTT---CGCAGCTCGCCTCGAGC 148556
|||||||||| | ||| | || | | || ||||||| || | | | | ||
Sbjct 60486 CCCTCGTACGTGGAGTAGGTACCCTCCTCCCTGGCCAGTTGAACGGACATGGTC---AGA 60430
Query 148557 GCGCCGTAGTAAATCGTCTCGGCAATTTGCCTGTTGAGCAGCGC-CGCC----GACTCGC 148611
||| ||| ||| || ||||| ||| | | | ||||| | ||| ||| || |
Sbjct 60429 GCGGCGTGGTAGATGGTCTCAAAAATCTTCTTATTGAG-ATCGCGAGCCTCAGGAGAC-- 60373
Query 148612 TTTCGTACGGCATACGCAGCCGCACAAACGCGTCGGCAAGGCCCTGTACGCCCACGCCAA 148671
||| | ||||| || || | || || || ||||| ||||| || || | || |
Sbjct 60372 --TCGAAAGGCATGCGGAGGGCGAGGAAGGCATCAGCAAGACCCTGGACACCAAGACCGA 60315
Query 148672 TGGGCCGGTGTTTAATGTTGGAGAGGCGCGCGCTCTCGAGC-GGATAGTGGTTGCGGTCG 148730
|||| ||||| |||||| | ||| || ||| || | || ||||||||| ||
Sbjct 60314 TGGGGCGGTGACGCATGTTGCTGTTGCGAGC-CTCAGGAACGGGGTAGTGGTTGACATCA 60256
Query 148731 ATGATCTTGTCAAGATTGCGCACCACCACCTTTGTAATTCTGCGCAGCAATTCAAAATCG 148790
|||||||||| || ||||| || || |||| || | | | ||| | ||||||
Sbjct 60255 ATGATCTTGTTCAGGTTGCGAACAACGACCTGAGTGACCTCGTGAAGCTTCTGGAAATCG 60196
Query 148791 TA---------CTTGTCATCTACGATGCATCGGTTCACGGCGATAGAGGCTAGATTGCAC 148841
|| |||| || |||| | | || || ||| | |||||| | |||||
Sbjct 60195 TAAACACCCTCATTGTAGTCAACGAAG-GTAGG--CAGGGCAAGAGAGGCCAAGTTGCAG 60139
Query 148842 ACGGCCGTCTCATCCGGGGCGCTGTACTCTACGATCTCGGCGCACAGATTGCTGCATTTG 148901
|| || |||||| ||||||| |||||| | ||||| | ||| || ||| || |
Sbjct 60138 ACAGCGACCTCATCGGGGGCGCAGTACTCAATAATCTCAGTGCAGAGGTTGGAGCTGCGG 60079
Query 148902 ATCACGCCCACGTTCTTTTGATTGCTCTTGCTGTTGCACGCGTCCTTGTACAGCATGTAC 148961
|| || | ||||||||| |||||||||| ||| || |||||||| |||||| |
Sbjct 60078 ATGGTTCCGAGGTTCTTTTGGTTGCTCTTGCGGTTCGCGGCATCCTTGTAAAGCATGAAG 60019
Query 148962 GGTCCGCCAGTTTCCACCTGCGTTTCCACTAT---GAACCGATGCAGGTCCTGCGCGCGC 149018
|| ||| || || ||| | || | || | ||| | || | ||| ||
Sbjct 60018 GGGTTGCCGGTCTCAGTCTGAGCCTCGAGGATGGCGTACCAA---AGCTTCTGGGC---- 59966
Query 149019 ACTTGCTGCTCGTAGCGACCCT---CCT---GCTCGTA--TAAAGTATACAGCCGCTCGA 149070
|||| || || | |||||||| ||| ||||||| | ||| | || ||| |
Sbjct 59965 -CTTGATGGTC-TTGCGACCCTTGCCCTCGCGCTCGTACTTTTCGTACAAGGC--CTCAA 59910
Query 149071 ACGCCTCGCCGTAGCAATCGTCGAGACCGGGGCACTTGTGCGGGCACATGAGCGACCACA 149130
|| ||||||||||||| || | || |||||||||| || ||||||||||| | |||
Sbjct 59909 ACTCCTCGCCGTAGCAGTCAGCCAGGCCGGGGCACTCGTTGGGGCACATGAGGGTCCATT 59850
Query 149131 CGCCGTCCGCGTACACGCGCTTCATAAACAGATCGGGCACCCAGAGCGCGTACATGAGGT 149190
|| ||| | | || | |||||| ||||||||||| | |||||| ||| | ||||
Sbjct 59849 CGGCGTTCTTCTCGACTCTCTTCATGAACAGATCGGGGATCCAGAGGGCGAGGAAAAGGT 59790
Query 149191 CGCGCGCCTTGCAGTCTTCGGCGCCCATGTTGCGGCGCAGGTTGA-GCACGCTGAATATG 149249
| || || | || || ||| ||| ||||| || | | || | ||| |
Sbjct 59789 CACGGGCACGGACCTCCTCCTTGCCGTGGTTCTTGCGCAAGTCCATGAACTC-GAAGACA 59731
Query 149250 TCCGCGTGCCACGGCTCAATGTACACCGCGAGCGCGCCCTTGCGC---TTGCCGCCCTGG 149306
|| |||||||| ||||||| ||| | |||| || || ||| ||||| ||||||
Sbjct 59730 TCGGCGTGCCAGGGCTCAAGGTAGATGGCGAAGGCACCAGGACGCTTGTTGCCACCCTGG 59671
Query 149307 TCGACGTGGCGCACCATGTTGTTAAACACTCGAACCATAGGTTCAATGCCACTGGCAGTG 149366
||||||| ||| | ||||||| || || |||| ||| || | ||| | | |||
Sbjct 59670 TCGACGTAGCGAGCAGTGTTGTTGAAGACACGAAGCATGGGAATGACGCCGTTAGAGGTG 59611
Query 149367 CCGTTAGTAGAGCTAATGCGACTGCCGCGCGCTCGCACTTTGTGCACGTTGACGCCGATG 149426
||||| || | |||| ||| || || | ||| |||||| ||| |||
Sbjct 59610 CCGTTGGTGCCGGCAATGTAGGAGCCAGTGGCACGGATACGGTGAGCGTTGAGGCCAATG 59551
Query 149427 CCGCC-GCCGTACTTTGAGATGGCCGCGCAGTCGCCGAGCGTCGAGTAGATGCCCTCGAT 149485
|| || ||| | ||| ||||| |||||| ||| || |||||| ||||| ||
Sbjct 59550 CCACCAGCCAT-CTTGGAGATCATGGCGCAGGTCTTGAGGGTGTCGTAGATACCCTCAAT 59492
Query 149486 GCTGTCGCGCTTCATGGTCAGCAGAAAGCACGAGCACATTTGCGGAAAACGCGTGCCGGC 149545
| ||| ||||||| | || ||||| || ||| || | | || |||||
Sbjct 59491 GGAGTCTTCCTTCATGTCGACGAGGAAGCATGAAGACAGCTGGCACTGAGGGGTACCGGC 59432
Query 149546 CGCGAACATGGTGGGGCTGGCGTGTGT-AAAATATTTCTGGCTCATCATCTCGTACGACT 149604
||| | |||||| ||||||||| || | || |||| ||| | | ||| | ||
Sbjct 59431 ATTGAAAAGTGTGGGGGAGGCGTGTGTGAAGAACTTGCTGG-ACATGAGGTTGTAGGTCT 59373
Query 149605 CGAGCACGCGGTCCATGTCATCGCCATGGATGCCTATGGCGACGCGCATCAGCATATGCT 149664
||| ||||| || | || ||||| ||| || | ||||| ||||| | ||| ||||
Sbjct 59372 CGATGACGCGCTCAACATCGTCGCCCCAGATACCGACTGCGACACGCATGATCATGTGCT 59313
Query 149665 GCGGTCGCTCCGCCACTTTGTTTCCAATTTTGAGCAAGTAGCCGTTTTCTAGTGTCTTGT 149724
|||||| ||| || | ||| | | ||||||| ||| | || || ||||||
Sbjct 59312 GCGGTCTCTCGGCAATCTTGCCGTCGAGCTTGAGCAGGTATGATCTCTCCAGAGTCTTGA 59253
Query 149725 AGCCAAAGTACTTGTAGTCAAAGTCGCGGCCGTGGTCAATGGCGGCGTC 149773
|||| ||||| | ||||| ||||||||| ||| | | ||||| | |||
Sbjct 59252 AGCCGAAGTATTGGTAGTTGAAGTCGCGGTCGTAGACGATGGCAGAGTC 59204
>seq766
Length=50960
Score = 114 bits (126), Expect = 1e-20
Identities = 114/148 (77%), Gaps = 0/148 (0%)
Strand=Plus/Minus
Query 133505 GTCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTT 133564
|||||||||||||||||| ||| | || | |||||||||||||| |||||||| |||||
Sbjct 261 GTCCTCGAGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGGTCGGGGGGGATGCCCTCCTT 202
Query 133565 GTCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGAC 133624
||| |||||| ||||| | || | |||||||| || ||| || || | ||| |
Sbjct 201 GTCCTGGATCTTGGACTTGACATTGTCGATCGTGTCGGAGGACTCGACCTCAAGGGTAAT 142
Query 133625 GGTTTTGCCGGTCAGAGTTTTTACGAAA 133652
||| || || ||||| || || ||||||
Sbjct 141 GGTCTTACCCGTCAGGGTCTTCACGAAA 114
>seq866
Length=7889
Score = 111 bits (122), Expect = 2e-19
Identities = 149/205 (73%), Gaps = 2/205 (1%)
Strand=Plus/Minus
Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515
||| | ||| ||||| ||||| || ||||| || || |||| ||| |||||| ||||
Sbjct 2848 ATGCAGGGTAGACTCCTTCTGGATGTTGTAGTCCGACAACGTGCGACC-GTCCTCAAGCT 2790
Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575
|||| || ||| | || | |||||||||||||| ||||| || ||||| || |||||
Sbjct 2789 GCTTTCCGGCGAAGATCAAGCGCTGCTGGTCGGGGGGGATACCCTCCTTATCTTGGATCT 2730
Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635
| ||| | | |||| ||||| | | || || |||| |||| || ||||| |
Sbjct 2729 TCGACTTAACGTTGTCAATGGTGTCTGAAGATTCAACCTCGAGCGTGATTGTCTTGCCAG 2670
Query 133636 TCAGAGTTTTTACGAAAATCTGCAT 133660
| ||||| || ||||| ||||||||
Sbjct 2669 TAAGAGTCTTCACGAAGATCTGCAT 2645
Score = 111 bits (122), Expect = 2e-19
Identities = 149/205 (73%), Gaps = 2/205 (1%)
Strand=Plus/Minus
Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515
||| | |||||| || ||||| || ||||| |||| || ||| ||| | || || | ||
Sbjct 3076 ATGAAGGGTGGATTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGACCA-TCTTCCAACT 3018
Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575
|||| || ||| | || || |||||||||||||||||||| || ||||| || ||||
Sbjct 3017 GCTTTCCAGCGAAGATAAGACGCTGCTGGTCGGGAGGGATACCCTCCTTATCCTGAATCT 2958
Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635
| ||| | | |||| |||||| | | ||| || || | ||| | || ||||| |
Sbjct 2957 TAGACTTCACGTTGTCAATCGTGTCTGATGACTCGACCTCCAAGGTAATCGTCTTGCCAG 2898
Query 133636 TCAGAGTTTTTACGAAAATCTGCAT 133660
||| || || ||||| ||||||||
Sbjct 2897 TCAACGTCTTCACGAAGATCTGCAT 2873
Score = 89.7 bits (98), Expect = 5e-13
Identities = 134/188 (71%), Gaps = 2/188 (1%)
Strand=Plus/Minus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522
|||||||| ||||| || ||||| ||| | ||| | | | ||||| || ||||||||
Sbjct 2613 GTGGACTCCTTCTGAATGTTGTAGTCGGAGAGGGTGCGGCCA-TCCTCAAGTTGCTTGCC 2555
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
|| | || | ||||||||||| ||||| ||||| |||||||| ||||| |||
Sbjct 2554 AGCAAAGATCAAACGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGAATCTTGGACTT 2495
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642
|| | || | || || | | ||| || || | ||||| ||| |||||||| || ||
Sbjct 2494 GACGTTGTCGATGGTATCAGAAGACTCGACCTCAAGGGTGATGGTCTTGCCGGTGAGGGT 2435
Query 133643 TTTTACGA 133650
|| ||||
Sbjct 2434 CTTGACGA 2427
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 483409808219560
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