Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20godetiae_20[genbank_20GCA_5F001663355.1_202016-06- 15] 1,819 sequences; 35,034,269 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq866 89.7 1e-12 >seq866 Length=7889 Score = 89.7 bits (98), Expect = 1e-12 Identities = 136/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || ||| | || || || ||||| || ||||| || || || ||||| | || Sbjct 2888 AAGACGTTGACTGGCAAGACGATTACCTTGGAGGTCGAGTCATCAGACACGATTGACAAC 2947 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| |||||||| || || || || || || ||| || | ||||||||| Sbjct 2948 GTGAAGTCTAAGATTCAGGATAAGGAGGGTATCCCTCCCGACCAGCAGCGTCTTATCTTC 3007 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || |||||||||||||||||||| | || || ||| |||||| ||||||| || || Sbjct 3008 GCTGGAAAGCAGTTGGAAGATGGTCGCACCCTGAGCGACTACAACATCCAGAAGGAATCC 3067 Query 206365 ACTCTTCACCTTGT 206378 || ||||| || || Sbjct 3068 ACCCTTCATCTCGT 3081 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181793256558299