Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20godetiae_20[genbank_20GCA_5F001663355.1_202016-06-
15] 1,819 sequences; 35,034,269 total letters
Query= NC_026421.1
Length=182380
Score E
Sequences producing significant alignments: (Bits) Value
seq415 116 4e-21
>seq415
Length=23879
Score = 116 bits (128), Expect = 4e-21
Identities = 200/288 (69%), Gaps = 2/288 (1%)
Strand=Plus/Plus
Query 147106 ACGTAAAACTG-GCACAGGATGTGGCACGGCGGCAGCGCCATGGCGGGCAGGTCCGCGGG 147164
||||| ||||| ||| | ||||||||||| || || ||||| |||||||| ||
Sbjct 2567 ACGTAGAACTGCGCAAAC-ATGTGGCACGGTGGGAGGGCCATCTTCTTGAGGTCCGCTGG 2625
Query 147165 GTTCCAGGCCGAGACCACCAGCCGCCTGCTCTCGGGGTTCCTCTTAATCTCTTCGATAAC 147224
|||||| || || | | || | | | ||||||| |||| | || | ||| ||
Sbjct 2626 GTTCCACGCGCTGAGGAGAATGCGGCGGTCGTAGGGGTTCGTCTTGAGCTTGTGGATGAC 2685
Query 147225 CCACCTCAGCTGGTCCACGCCCTGGCCCCCGTAGTTTGTCCCGCAGTCCACGTACCTGGC 147284
| || ||||| ||||| |||||| ||| | ||| | |||| |||||| ||
Sbjct 2686 CTCGGCCAATTGGTCGACGCCTTGGCCCGTGTAATCCGTCTTGGAGTCGACGTACTCAGC 2745
Query 147285 CCCAAAGTGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCCGGGCTTTCTGTGCGA 147344
|||||||| | ||| ||||||||||| || || || ||||||||| | | ||| ||
Sbjct 2746 GCCAAAGTGGCGCCATTGGAAGCCGTAGACGGGGCCGAGGTCGCCGACTTCGCGGTGTGA 2805
Query 147345 GAAGCCCGCCCGCTTGAGAAACTCGGGGGACCCGTGGGCGTCCCAGAT 147392
|| ||| | | | ||| |||||| | || |||| | ||||||||||
Sbjct 2806 GAGGCCGACGCTGTCGAGGAACTCGCGCGATCCGTTGCCGTCCCAGAT 2853
Score = 105 bits (116), Expect = 8e-18
Identities = 132/181 (73%), Gaps = 0/181 (0%)
Strand=Plus/Plus
Query 146906 CCAGCTGAATTTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGT 146965
||||||| | || || | |||||||||| ||| ||||||||||| |||| | ||
Sbjct 2310 CCAGCTGCACCTTGAGCGCGTCCACGTGGTCCGCGTATACGTGCGCGTCGCCCATGACGT 2369
Query 146966 GCACAAAGTCCCCCGGCTTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGT 147025
|| | | |||||| ||| || | | | || | ||||| || || |||| ||
Sbjct 2370 GCGTGAGGCTTCCCGGCACCAGGTCGCACGCCCGCGCAATCATGTGCGTCAGGAGCGCGT 2429
Query 147026 AGCTGGCTATGTTGAAGGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGC 147085
||||||| ||||||||||| || || || |||||||| | |||| ||||||||||||||
Sbjct 2430 AGCTGGCAATGTTGAAGGGCACGCCGAGTCCCATGTCGCAGGACCGCTGGTACAGCTGGC 2489
Query 147086 A 147086
|
Sbjct 2490 A 2490
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583474732941600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |