Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20godetiae_20[genbank_20GCA_5F001663355.1_202016-06- 15] 1,819 sequences; 35,034,269 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq415 116 4e-21 >seq415 Length=23879 Score = 116 bits (128), Expect = 4e-21 Identities = 200/288 (69%), Gaps = 2/288 (1%) Strand=Plus/Plus Query 147106 ACGTAAAACTG-GCACAGGATGTGGCACGGCGGCAGCGCCATGGCGGGCAGGTCCGCGGG 147164 ||||| ||||| ||| | ||||||||||| || || ||||| |||||||| || Sbjct 2567 ACGTAGAACTGCGCAAAC-ATGTGGCACGGTGGGAGGGCCATCTTCTTGAGGTCCGCTGG 2625 Query 147165 GTTCCAGGCCGAGACCACCAGCCGCCTGCTCTCGGGGTTCCTCTTAATCTCTTCGATAAC 147224 |||||| || || | | || | | | ||||||| |||| | || | ||| || Sbjct 2626 GTTCCACGCGCTGAGGAGAATGCGGCGGTCGTAGGGGTTCGTCTTGAGCTTGTGGATGAC 2685 Query 147225 CCACCTCAGCTGGTCCACGCCCTGGCCCCCGTAGTTTGTCCCGCAGTCCACGTACCTGGC 147284 | || ||||| ||||| |||||| ||| | ||| | |||| |||||| || Sbjct 2686 CTCGGCCAATTGGTCGACGCCTTGGCCCGTGTAATCCGTCTTGGAGTCGACGTACTCAGC 2745 Query 147285 CCCAAAGTGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCCGGGCTTTCTGTGCGA 147344 |||||||| | ||| ||||||||||| || || || ||||||||| | | ||| || Sbjct 2746 GCCAAAGTGGCGCCATTGGAAGCCGTAGACGGGGCCGAGGTCGCCGACTTCGCGGTGTGA 2805 Query 147345 GAAGCCCGCCCGCTTGAGAAACTCGGGGGACCCGTGGGCGTCCCAGAT 147392 || ||| | | | ||| |||||| | || |||| | |||||||||| Sbjct 2806 GAGGCCGACGCTGTCGAGGAACTCGCGCGATCCGTTGCCGTCCCAGAT 2853 Score = 105 bits (116), Expect = 8e-18 Identities = 132/181 (73%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 146906 CCAGCTGAATTTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGT 146965 ||||||| | || || | |||||||||| ||| ||||||||||| |||| | || Sbjct 2310 CCAGCTGCACCTTGAGCGCGTCCACGTGGTCCGCGTATACGTGCGCGTCGCCCATGACGT 2369 Query 146966 GCACAAAGTCCCCCGGCTTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGT 147025 || | | |||||| ||| || | | | || | ||||| || || |||| || Sbjct 2370 GCGTGAGGCTTCCCGGCACCAGGTCGCACGCCCGCGCAATCATGTGCGTCAGGAGCGCGT 2429 Query 147026 AGCTGGCTATGTTGAAGGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGC 147085 ||||||| ||||||||||| || || || |||||||| | |||| |||||||||||||| Sbjct 2430 AGCTGGCAATGTTGAAGGGCACGCCGAGTCCCATGTCGCAGGACCGCTGGTACAGCTGGC 2489 Query 147086 A 147086 | Sbjct 2490 A 2490 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583474732941600