Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20godetiae_20[genbank_20GCA_5F001663355.1_202016-06-
15] 1,819 sequences; 35,034,269 total letters
Query= NC_027923.1
Length=132831
Score E
Sequences producing significant alignments: (Bits) Value
seq866 91.5 1e-13
>seq866
Length=7889
Score = 91.5 bits (100), Expect = 1e-13
Identities = 139/198 (70%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110
|| || || || || || ||||||||||||| | |||| | ||||| | ||| || ||
Sbjct 3069 GTGGATTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGACCATCTTCCAACTGCTTTCCA 3010
Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170
||| | || |||||||| || || || || | |||||| ||||| ||||| |||
Sbjct 3009 GCGAAGATAAGACGCTGCTGGTCGGGAGGGATACCCTCCTTATCCTGAATCTTAGACTTC 2950
Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230
| | | || | ||||||| | || || || | || || | ||||| |||| ||
Sbjct 2949 ACGTTGTCAATCGTGTCTGATGACTCGACCTCCAAGGTAATCGTCTTGCCAGTCAACGTC 2890
Query 27231 TTCACAAAGATTTGCATA 27248
||||| ||||| ||||||
Sbjct 2889 TTCACGAAGATCTGCATA 2872
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 424924979602728
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |