Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20godetiae_20[genbank_20GCA_5F001663355.1_202016-06- 15] 1,819 sequences; 35,034,269 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq866 91.5 1e-13 >seq866 Length=7889 Score = 91.5 bits (100), Expect = 1e-13 Identities = 139/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 || || || || || || ||||||||||||| | |||| | ||||| | ||| || || Sbjct 3069 GTGGATTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGACCATCTTCCAACTGCTTTCCA 3010 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 ||| | || |||||||| || || || || | |||||| ||||| ||||| ||| Sbjct 3009 GCGAAGATAAGACGCTGCTGGTCGGGAGGGATACCCTCCTTATCCTGAATCTTAGACTTC 2950 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | | || | ||||||| | || || || | || || | ||||| |||| || Sbjct 2949 ACGTTGTCAATCGTGTCTGATGACTCGACCTCCAAGGTAATCGTCTTGCCAGTCAACGTC 2890 Query 27231 TTCACAAAGATTTGCATA 27248 ||||| ||||| |||||| Sbjct 2889 TTCACGAAGATCTGCATA 2872 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424924979602728