Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20godetiae_20[genbank_20GCA_5F001663355.1_202016-06-
15] 1,819 sequences; 35,034,269 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq1170 217 2e-51
seq607 111 2e-19
>seq1170
Length=97779
Score = 217 bits (240), Expect = 2e-51
Identities = 1110/1752 (63%), Gaps = 57/1752 (3%)
Strand=Plus/Minus
Query 117837 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGAC 117896
|| ||||||||||| ||||||||||| || |||||||| || | ||||| ||
Sbjct 61032 CGCAGGTAGTACATGCCCGTCTTGAGACCAAGCTTCCAGCCAGCGAAGTGCATGCTGGTG 60973
Query 117897 AACTTGGAGAGGGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAG 117956
| |||| | || || | |||| || ||| | ||||| || || ||||||
Sbjct 60972 ATCTTGCCCATTGTCGGGTCCTTCATGTGGATGTTGAGGGACTGGGACTGGTCAATGAAG 60913
Query 117957 CGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTTG---ATTTCCCACACAGTC 118013
|| ||||| || ||||| | || || | | || | |||||||| || |||
Sbjct 60912 GCACCACGATCGGCAGCCATCTGAA---CAACGGTGCGCTGGGAGATTTCCCAGACGGTC 60856
Query 118014 CTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGATCCACCCGCC 118073
|||| || ||| | || | ||||| | ||| || || | ||| ||| |
Sbjct 60855 TTGTACAGAGCCTTGACCTCGGCGGGGATGTTAGGGATGTTCTGAACGGA---ACCGTTC 60799
Query 118074 TTGACCATGAGA---TCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGATCCTCC 118130
| | | |||| | | |||||| | | ||||| | || || | ||||||| |
Sbjct 60798 TCGGCGATGATACGGTTCTTCATGGCATCGGACCACAAGCCCATGTCGACAAGATCCTTC 60739
Query 118131 ACGAGATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATATTG 118190
| || |||||||| ||||| || ||||| || | | | ||||| |||
Sbjct 60738 AGCAGCCAGGGGTTGACAACCTGGAACTCGCCGGCGAGAACACGGCGCTGGTAGATGTTG 60679
Query 118191 GTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGC 118250
| ||||| ||||| |||||||| ||||| |||||||| |||| |||||||| || |||
Sbjct 60678 GAGGTGTAGGGCTCGAAGCACTCGTTGTTGCCCAAGATCTGGGAAGTGGAGGCAGTAGGC 60619
Query 118251 ATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGAGCG 118310
||||| || | || | ||||| || | ||| | ||| | || | ||||| |||| |
Sbjct 60618 ATGGGAGCAACAAGCAAACTGTTGCGAACACCGTGCTCCTTGATTTGCTCCTTCAGAGAG 60559
Query 118311 TCCCAGTCGTAGTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGG 118370
|||||||| || | | || | | |||||| || |||| |||||||| |||
Sbjct 60558 TCCCAGTCCCAGAGGTCAGAGGGCTTGACATTCCACATGTCGTACTGAAGGATACCCTGG 60499
Query 118371 GACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATT---CGGAG 118427
|| || || ||||| | || || | ||||| || |||| || ||||
Sbjct 60498 GAGATAGGGGAGCCCTCGTACGTGGAGTAGGTACCCTCCTCCCTGGCCAGTTGAACGGAC 60439
Query 118428 CTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCATTGCCTTGGCC 118487
| | | || || ||||| || || || |||||||| ||| | | |||
Sbjct 60438 ATGGTC---AGAGCGGCGTGGTAGATGGTCTCAAAAATCTTCTTATTGAGATCGCGAGCC 60382
Query 118488 TCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTGGACACCG 118547
|| || || || | | ||| | || |||| || ||||| ||||||||
Sbjct 60381 TCAGGAGACTCGAAAGGCATGCGGAGGGCGAGGAAGGCATCAGCAAGACCCTGGACACCA 60322
Query 118548 AGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCC---ACGGGATAAAAA 118604
|| || || ||||| || | ||| || || ||||| ||| ||||| ||
Sbjct 60321 AGACCGATGGGGCGGTGACGCATGTTGCTGTTGCGAGC---CTCAGGAACGGGGTAGTGG 60265
Query 118605 TTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTT 118664
|| ||| || | | | || || || || |||| |||| || ||||||||
Sbjct 60264 TTGACATCAATGATCTTGTTCAGGTTGCGAACAACGACCTGAGTGACCTCGTGAAGCTTC 60205
Query 118665 TCGTAATCA-AAACTGCG--AGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCC 118721
| | |||| |||| | | | | ||| || | |||| ||||| | || |||
Sbjct 60204 TGGAAATCGTAAACACCCTCATTGTAGTCAACGA---AGGTAGGCAGGGCAAGAGAGGCC 60148
Query 118722 AGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTGCACAAGTTT 118781
| || || |||| | |||||| | |||||| ||||| || ||||| | |||
Sbjct 60147 AAGTTGCAGACAGCGACCTCATCGGGGGCGCAGTACTCAATAATCTCAGTGCAGAGGTTG 60088
Query 118782 GAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAA 118841
|| || ||||| || | ||||||||| || ||| ||| ||||||||||||
Sbjct 60087 GAGCTGCGGATGGTTCCGAGGTTCTTTTGGTTGCTCTTGCGGTTCGCGGCATCCTTGTAA 60028
Query 118842 AGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA-CATCGGC 118900
|||||| | || | || ||||| || || | || ||| || || | ||| | | || |
Sbjct 60027 AGCATGAAGGGGTTGCCGGTCTCAGTCTGAGCCTCGAGGATGGCGTACCAAAGCTTCTGG 59968
Query 118901 AGCTGGCACAGTGGCGTTGGCTCGC---CCCTCTTCCTCGTACTTTGTGTAGAGGGCTTC 118957
|| | ||| ||| | | ||||| |||||||||| ||| | ||| ||
Sbjct 59967 GCCTTGA----TGGTCTTGCGACCCTTGCCCTCGCGCTCGTACTTTTCGTACAAGGCCTC 59912
Query 118958 AAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCA 119017
|||||| || || | || | || || || || | ||||| | ||| | |||
Sbjct 59911 AAACTCCTCGCCGTAGCAGTCAGCCAGGCCGGGGCACTCGTTGGGGCACATGAGGGTCCA 59852
Query 119018 TTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAG 119077
|| | || ||| || | ||||||||| || || ||||||||||| || ||| ||
Sbjct 59851 TTCGGCGTTCTTCTCGACTCTCTTCATGAACAGATCGGGGATCCAGAGGGCGAGGAAAAG 59792
Query 119078 ATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGAT 119137
|| || || | || || | || || || ||||| |||| || || | ||
Sbjct 59791 GTCACGGGCACGGACCTCCTCCTTGCCGTGGTTCTTGCGCAAGTCCATGAACTCGAAGAC 59732
Query 119138 ATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACGACGA------CCAGC 119191
||| |||||||| || || ||||| | |||| | || | |||| ||| |
Sbjct 59731 ATCGGCGTGCCAGGGCTCAAGGTAGATGGCGAAGGCACC---AGGACGCTTGTTGCCACC 59675
Query 119192 CTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGATACCATCGGA 119251
||||| || || | |||||| ||| || ||||||||||| ||||||| || | ||
Sbjct 59674 CTGGTCGACGTAGCGAGCAGTGTTGTTGAAGACACGAAGCATGGGAATGACGCCGTTAGA 59615
Query 119252 TTGGCCATTTGTCCCCCGAA--TACGAGACTTATTGGCTCTGACATCGTGGATGTGCATA 119309
||| || || || || || ||| | | |||| | || | ||| || |
Sbjct 59614 GGTGCCGTTGGTGCCGGCAATGTAGGAGCC--AGTGGCACGGATACGGTGAGCGTTGAGG 59557
Query 119310 CCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCA 119369
||||| || || ||| ||| ||||| ||||| | |||| || ||||||| ||
Sbjct 59556 CCAATGCCACCAGCCATCTTGGAGATCATGGCGCAGGTCTTGAGGGTGTCGTAGATACCC 59497
Query 119370 TCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGCCTG-GGTGT 119428
|| || ||||| |||| | ||| ||||||||| |||| || | ||| || ||
Sbjct 59496 TCAATGGAGTCTTCCTTCATGTCGACGAGGAAGCATGAAGACAGCTG-GCACTGAGGGGT 59438
Query 119429 ACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATACCTTG--GGACATCTTGTCG 119486
||| || ||||| || || || | ||||| ||| | | |||| |||||| || |
Sbjct 59437 ACCGGCATTGAAAAGTGTGGGGGAGGCGTGTGTGA--AGAACTTGCTGGACATGAGGTTG 59380
Query 119487 TAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCATAAAC 119546
|||||||| | |||| || || || || ||||||| | ||| ||||| | |
Sbjct 59379 TAGGTCTCGATGACGCGCTCAACATCGTCGCCCCAGATACCGACTGCGACACGCATGATC 59320
Query 119547 ATGTATTGGGGT 119558
|||| || |||
Sbjct 59319 ATGTGCTGCGGT 59308
>seq607
Length=5268
Score = 111 bits (122), Expect = 2e-19
Identities = 276/412 (67%), Gaps = 19/412 (5%)
Strand=Plus/Plus
Query 14066 TCAAAGCGACCTGGGCGGAGGAGGGCGTCGTCAAGGATATCAATGCGGTTCGTCGCCGCG 14125
|| || ||||| || || | || || | |||||| ||||| | ||| || |||||
Sbjct 3136 TCGAAACGACCGGGACGCATCAGCGCCTTGTCAAGAATATCGGCTCTGTTGGTGCCCGCG 3195
Query 14126 ATGACAACGATGCCCG-TCTCGT-TATCAAAGCCATCCATCTCAGTCAAGAGTTGATTGA 14183
| |||||||| || | ||| | ||| || || |||||||| ||||||| || || |
Sbjct 3196 AGGACAACGA--CCTGCTCTTGGGTATTGAAACCGTCCATCTCTGTCAAGATCTGGTTCA 3253
Query 14184 TGGTTTGTTCGCGTTCATCATTCGCAGGCATACCAC--CCGCACTGCGTTGCTT-ACCGA 14240
||| |||||| |||||||| | ||| | || ||| ||| | ||| |
Sbjct 3254 GAGTTGCTTCGCGCTCATCATTGCCGCCCATGCGGTTTCCTTCCTGTCTTGATCGACCAA 3313
Query 14241 CGGCGTCAATTTCATCGATGAAAACGATACATGGTTGATTTTCACGGGCAACTTCAAAGA 14300
|||||| |||||||| ||||| | |||||| || | | | ||||| | |||| |
Sbjct 3314 TGGCGTCGATTTCATCAATGAAGATGATACAGGGGGCACTCTTGCGGGCGTTTGCAAACA 3373
Query 14301 TATCTCGCACTCTCTTGGCACCGACACCCACAAACATCTCCACAAAATTGGCGGCGGAA- 14359
||||||||||| | ||| ||||| ||||||||||| || || | |||||
Sbjct 3374 AGTCTCGCACTCTTGAAGGACCAACACCGACAAACATCTCGACGAACT------CGGAAC 3427
Query 14360 CATTG-----GATGAAGGGGACGTTAGATTCACCCGCGATGGCTCGGGCGAGGAGGGTCT 14414
|| || || |||||| || ||| || || ||| |||| ||| || | ||||
Sbjct 3428 CACTGACGCTGAAGAAGGGCACACCAGACTCGCCAGCGGTGGCCTTGGCAAGCAACGTCT 3487
Query 14415 TCCCCGTCCCTGGTTTCCCTGCGAGAAGGGCACCACGTGGGATCCTGGCACC 14466
| || || || || || ||||| | ||||||||| || ||| | || ||
Sbjct 3488 TACCGGTTCCAGGAGGTCCGGCGAGGATGGCACCACGAGGAATCTTTGCGCC 3539
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618421138329640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |