Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20godetiae_20[genbank_20GCA_5F001663355.1_202016-06- 15] 1,819 sequences; 35,034,269 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq415 118 9e-22 >seq415 Length=23879 Score = 118 bits (130), Expect = 9e-22 Identities = 164/227 (72%), Gaps = 2/227 (1%) Strand=Plus/Plus Query 29589 CCCTCCTGTTTATCCTCAGTGTGGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAATCCTCA 29648 |||| |||| ||| ||| ||| ||| ||| ||||| | ||| ||||| | | | | Sbjct 2265 CCCTGTTGTTGATCTCCAGCAAGGGGAAGTCTCTCGGCTCGCGCTCCAGCTGCACCTTGA 2324 Query 29649 GCGGTTCCACGTGGTCAAGGTAGACGTGAGCATCTCCCAGGGTGTG-GACAAACTCTCCC 29707 ||| ||||||||||| ||| ||||| || || |||| | ||| | | || |||| Sbjct 2325 GCGCGTCCACGTGGTCCGCGTATACGTGCGCGTCGCCCATGACGTGCGTGAGGCT-TCCC 2383 Query 29708 GGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTA 29767 || | || || | | || ||||||| ||| ||||| | ||||||||| ||||| Sbjct 2384 GGCACCAGGTCGCACGCCCGCGCAATCATGTGCGTCAGGAGCGCGTAGCTGGCAATGTTG 2443 Query 29768 AAGGGCACCCCGAGCCCCATGTCCCCTGACCTCTGGTAGAGCTGGCA 29814 |||||||| ||||| |||||||| | |||| |||||| |||||||| Sbjct 2444 AAGGGCACGCCGAGTCCCATGTCGCAGGACCGCTGGTACAGCTGGCA 2490 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406154195742634