Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20godetiae_20[genbank_20GCA_5F001663355.1_202016-06-
15] 1,819 sequences; 35,034,269 total letters
Query= NC_030394.2
Length=126965
Score E
Sequences producing significant alignments: (Bits) Value
seq415 118 9e-22
>seq415
Length=23879
Score = 118 bits (130), Expect = 9e-22
Identities = 164/227 (72%), Gaps = 2/227 (1%)
Strand=Plus/Plus
Query 29589 CCCTCCTGTTTATCCTCAGTGTGGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAATCCTCA 29648
|||| |||| ||| ||| ||| ||| ||| ||||| | ||| ||||| | | | |
Sbjct 2265 CCCTGTTGTTGATCTCCAGCAAGGGGAAGTCTCTCGGCTCGCGCTCCAGCTGCACCTTGA 2324
Query 29649 GCGGTTCCACGTGGTCAAGGTAGACGTGAGCATCTCCCAGGGTGTG-GACAAACTCTCCC 29707
||| ||||||||||| ||| ||||| || || |||| | ||| | | || ||||
Sbjct 2325 GCGCGTCCACGTGGTCCGCGTATACGTGCGCGTCGCCCATGACGTGCGTGAGGCT-TCCC 2383
Query 29708 GGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTA 29767
|| | || || | | || ||||||| ||| ||||| | ||||||||| |||||
Sbjct 2384 GGCACCAGGTCGCACGCCCGCGCAATCATGTGCGTCAGGAGCGCGTAGCTGGCAATGTTG 2443
Query 29768 AAGGGCACCCCGAGCCCCATGTCCCCTGACCTCTGGTAGAGCTGGCA 29814
|||||||| ||||| |||||||| | |||| |||||| ||||||||
Sbjct 2444 AAGGGCACGCCGAGTCCCATGTCGCAGGACCGCTGGTACAGCTGGCA 2490
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 406154195742634
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |