Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20godetiae_20[genbank_20GCA_5F001663355.1_202016-06-
15] 1,819 sequences; 35,034,269 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq866 131 4e-25
>seq866
Length=7889
Score = 131 bits (144), Expect = 4e-25
Identities = 159/215 (74%), Gaps = 4/215 (2%)
Strand=Plus/Minus
Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951
|||||||||||| || |||||||| || ||||||||||| || | || || | || ||
Sbjct 2857 GAGGACAAGATGCAGGGTAGACTCCTTCTGGATGTTGTAGTCCGACAACGTGCGACCGTC 2798
Query 151952 TTCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTT 152009
|| || ||||| ||||||||||| | | ||||||||| | | ||| || |||||
Sbjct 2797 CTCAAGCTGCTTT--CCGGCGAAGATCAAGCGCTGCTGGTCGGGGGGGATACCCTCCTTA 2740
Query 152010 TCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATA 152069
||||| || || || || | || | | |||||||| || || || || || ||
Sbjct 2739 TCTTGGATCTTCGACTTAACGTTGTCAATGGTGTCTGAAGATTCAACCTCGAGCGTGATT 2680
Query 152070 GTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| ||||| || |||||||||||||||| ||||||
Sbjct 2679 GTCTTGCCAGTAAGAGTCTTCACGAAGATCTGCAT 2645
Score = 113 bits (124), Expect = 1e-19
Identities = 155/215 (72%), Gaps = 4/215 (2%)
Strand=Plus/Minus
Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951
|||||| |||||||| || || || || ||||||||||| ||| | || | |||||
Sbjct 3085 GAGGACGAGATGAAGGGTGGATTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGACCATC 3026
Query 151952 TTCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTT 152009
||| | ||||| || ||||||||||| | ||||||||| | | ||| || |||||
Sbjct 3025 TTCCAACTGCTTT--CCAGCGAAGATAAGACGCTGCTGGTCGGGAGGGATACCCTCCTTA 2968
Query 152010 TCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATA 152069
|| ||||| || || || | || | ||||||| ||| || || | |||||
Sbjct 2967 TCCTGAATCTTAGACTTCACGTTGTCAATCGTGTCTGATGACTCGACCTCCAAGGTAATC 2908
Query 152070 GTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| ||||| || | ||||||||||||| ||||||
Sbjct 2907 GTCTTGCCAGTCAACGTCTTCACGAAGATCTGCAT 2873
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1153793909124549
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |