Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20graminicola_20[genbank_20GCA_5F001951205.1_202017- 01-13] 8,455 sequences; 59,914,086 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value seq460 102 8e-17 >seq460 Length=27106 Score = 102 bits (112), Expect = 8e-17 Identities = 145/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 142982 TGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGT 143041 |||| || || || || || |||||||||||||||| |||| ||| || || || Sbjct 24821 TGAAGCGTCGACTCCTTCTGAATGTTGTAATCGCTCAGGGTGCGACCGTCCTCCAGCTGC 24762 Query 143042 TTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTT 143101 || |||||| | || ||||| ||||| || ||||| || || || || || ||| || Sbjct 24761 TTTCCAGCAAAAATGAGACGCTGCTGGTCAGGAGGGATACCCTCCTTATCTTGAATCTTG 24702 Query 143102 TGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTC 143161 ||| | | || | ||||||| | || || || | || | ||||||||||||| Sbjct 24701 GATTTAACGTTGTCGATTGTGTCCGATGACTCAACCTCGAGCGTAATCGTCTTGCCGGTC 24642 Query 143162 AATGTTTTTACGAATATTTGCATA 143185 || || || ||||| ||||||||| Sbjct 24641 AAGGTCTTGACGAAGATTTGCATA 24618 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 506960814915600