Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20graminicola_20[genbank_20GCA_5F001951205.1_202017- 01-13] 8,455 sequences; 59,914,086 total letters Query= NC_005337.1 Length=134431 Score E Sequences producing significant alignments: (Bits) Value seq3 96.9 3e-15 >seq3 Length=97984 Score = 96.9 bits (106), Expect = 3e-15 Identities = 125/173 (72%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 5581 GCGCTCGCAGATCAGCTGCGCTATTCGGTCGCCCGTCTTTACCTCGAAATCGTTGTGGCC 5640 |||||| || ||||| || | ||||||||| || ||||| ||| | | | Sbjct 77936 GCGCTCTACGACGAGCTGGGCGACGCGGTCGCCCTCGGCGACTTCGAAGTCGGCTTCGGC 77877 Query 5641 GAAGTTGAACAGCACCACGCCCACGTTGCCGCGGTAGTCGGCGTCTATCACGCCCGCGCC 5700 | |||||| || | || || | ||||||||||||||||| || ||||| ||||| Sbjct 77876 GTGGTTGAAGAGGAGGACCTTGACCTCACCGCGGTAGTCGGCGTCGATGACGCCGGCGCC 77817 Query 5701 CACGTCGATGAAGTGCTTGACCGCCAGGCCGGAGCGGGGAGCCACGCGGCCGT 5753 | ||||||||||| |||| | || ||||||||||| || || | |||||||| Sbjct 77816 CGTGTCGATGAAGTTCTTGGCGGCGAGGCCGGAGCGCGGGGCAATGCGGCCGT 77764 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430010084909960