Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20graminicola_20[genbank_20GCA_5F001951205.1_202017- 01-13] 8,455 sequences; 59,914,086 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq460 89.7 4e-13 >seq460 Length=27106 Score = 89.7 bits (98), Expect = 4e-13 Identities = 114/157 (73%), Gaps = 0/157 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | ||||| || || || || ||||| | || || |||| ||||| | | Sbjct 24391 ATGCAGATCTTTGTCAAGACCTTGACCGGAAAGACCATCACACTCGAGGTCGAATCATCC 24450 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 |||||||| || | |||||| ||||| ||||| || ||||| ||||||||||| Sbjct 24451 GACACCATTGACAACGTCAAATCCAAGATCCAGGACAAGGAGGGCATTCCTCCCGATCAG 24510 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATG 24147 ||| | |||||| || ||| ||||| || ||||||| Sbjct 24511 CAGCGTTTGATTTTCGCCGGAAAGCAGCTGGAAGATG 24547 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429891697110525