Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20graminicola_20[genbank_20GCA_5F001951205.1_202017- 01-13] 8,455 sequences; 59,914,086 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq90 96.9 8e-15 >seq90 Length=51520 Score = 96.9 bits (106), Expect = 8e-15 Identities = 134/188 (71%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 243568 GGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTCATC 243627 ||||||||||| || ||| |||||||| || ||||| ||||||||| | || | Sbjct 5119 GGCATGAACTCCAGCCTGATGAAGCAGTACATTGAGTTCGTCGCCGACCGCCTCTTGGTT 5060 Query 243628 GCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAGCTCATT 243687 || ||||| | || || || ||||| || |||||||||| ||| |||||| ||| Sbjct 5059 GCCCTTGGCAACGACAAGGTCTACAAGTCTTCCAACCCCTTTGACTTCATGGAGAACATC 5000 Query 243688 TCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGTGATTATCAACGCCCTGGT 243747 || || || || || |||||||| || |||||||| || || ||| ||||| Sbjct 4999 TCCCTGGGCGGAAAGACCAACTTCTTTGAGAAGCGTGTTGCCGACTACCAAAAGGCTGGT 4940 Query 243748 GTGATGAA 243755 || ||||| Sbjct 4939 GTCATGAA 4932 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102760525354250