Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20graminicola_20[genbank_20GCA_5F001951205.1_202017- 01-13] 8,455 sequences; 59,914,086 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq794 84.2 2e-11 >seq794 Length=19185 Score = 84.2 bits (92), Expect = 2e-11 Identities = 85/109 (78%), Gaps = 4/109 (4%) Strand=Plus/Plus Query 47299 GTCATTGAAAGG--GACGTGCCCGACGAGCAGGACGAAGAAAACAACGCCGAGGGACCAG 47356 ||||| |||||| ||| ||| | | || ||| || ||| || |||||| | ||||||| Sbjct 13499 GTCATCGAAAGGTAGACATGC--GGCCAGAAGGGCGTAGAGAATAACGCCCAAGGACCAG 13556 Query 47357 ATGTCCGCCTTGTCCCCGCGGTACTTATTGCGATTCAGAATCTCGGGGG 47405 ||||| || |||||||||||||| | ||| | ||||||| ||| |||| Sbjct 13557 ATGTCTGCTTTGTCCCCGCGGTAGTGTTTGTGCTTCAGAAGCTCCGGGG 13605 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494670913941800