Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20graminicola_20[genbank_20GCA_5F001951205.1_202017-
01-13] 8,455 sequences; 59,914,086 total letters
Query= NC_014637.1
Length=617453
Score E
Sequences producing significant alignments: (Bits) Value
seq460 89.7 2e-12
>seq460
Length=27106
Score = 89.7 bits (98), Expect = 2e-12
Identities = 142/204 (70%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109
||| | || ||||| || || |||| || || || ||||| || || ||||| |||||
Sbjct 24619 ATGCAAATCTTCGTCAAGACCTTGACCGGCAAGACGATTACGCTCGAGGTTGAGTCATCG 24678
Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169
|| | || || ||||| || |||||||||||||| || || |||||||| ||
Sbjct 24679 GACACAATCGACAACGTTAAATCCAAGATTCAAGATAAGGAGGGTATCCCTCCTGACCAG 24738
Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229
|| ||| | ||||| | || || || || || || || | || || ||||| ||
Sbjct 24739 CAGCGTCTCATTTTTGCTGGAAAGCAGCTGGAGGACGGTCGCACCCTGAGCGATTACAAC 24798
Query 391230 ATTGATAAGGATGCAACACTTCAC 391253
||| | ||||| | || ||||||
Sbjct 24799 ATTCAGAAGGAGTCGACGCTTCAC 24822
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1975504371043140
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |