Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20graminicola_20[genbank_20GCA_5F001951205.1_202017- 01-13] 8,455 sequences; 59,914,086 total letters Query= NC_023681.1 Length=152710 Score E Sequences producing significant alignments: (Bits) Value seq460 98.7 1e-15 >seq460 Length=27106 Score = 98.7 bits (108), Expect = 1e-15 Identities = 144/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 137209 TGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGT 137268 |||| || || || || || |||||||||||||||| |||| ||| || || || Sbjct 24821 TGAAGCGTCGACTCCTTCTGAATGTTGTAATCGCTCAGGGTGCGACCGTCCTCCAGCTGC 24762 Query 137269 TTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTT 137328 || |||||| | || ||||| ||||| || ||||| || || || || || ||| || Sbjct 24761 TTTCCAGCAAAAATGAGACGCTGCTGGTCAGGAGGGATACCCTCCTTATCTTGAATCTTG 24702 Query 137329 TGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTC 137388 ||| | | || | ||||| | | || || || | || | ||||||||||||| Sbjct 24701 GATTTAACGTTGTCGATTGTGTCCGATGACTCAACCTCGAGCGTAATCGTCTTGCCGGTC 24642 Query 137389 AATGTTTTTACGAATATTTGCATA 137412 || || || ||||| ||||||||| Sbjct 24641 AAGGTCTTGACGAAGATTTGCATA 24618 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 488492367006000