Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20graminicola_20[genbank_20GCA_5F001951205.1_202017- 01-13] 8,455 sequences; 59,914,086 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq1012 304 2e-77 seq90 149 7e-31 >seq1012 Length=16087 Score = 304 bits (336), Expect = 2e-77 Identities = 1144/1770 (65%), Gaps = 31/1770 (2%) Strand=Plus/Plus Query 104222 CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTC 104281 || ||| ||||| ||||||| || || | || || || || ||| |||| ||| Sbjct 368 CCTCAGCACATGATCATGCGTGTCGCTGTGGGCATCTGGGGCGATGACGTTGAACGCGTC 427 Query 104282 TTGGAGACATACGACAAGATGTCC--CAAGGTATGTTCATTCACGCAACACCAACCCTCT 104339 | || || ||| || |||||| |||| | | | | |||||| | || || |||| Sbjct 428 ATCGAAACCTACAACCTGATGTCGAGCAAGTTCTTTAC--TCACGCCTCTCCTACGCTCT 485 Query 104340 TCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGG 104399 |||| || || || || | || ||||| |||||||||| ||| | ||||||| Sbjct 486 TCAACGCCGGCACCCCTCAGGCTCAGCTGTCCTCTTGCTTCCTTGTCGATATGAAGGAGG 545 Query 104400 ACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTG 104459 |||| ||| | |||||||| | || || | | || || ||||| || ||| | Sbjct 546 ACTCTATCGAGGGTATCTACGACACCCTCAAGACCTGCGCTATGATCTCCAAAATGGCCG 605 Query 104460 GGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAA 104519 | || ||||| | | |||| | | || | ||| ||| || || | Sbjct 606 GTGGCATTGGTCTCAATGTCCACCGCATCCGCGCTACCGGCTCTTACATTGCTGGCACCA 665 Query 104520 ATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATG 104579 | ||| || | ||| | |||| ||||| || || || || ||| || ||||| | Sbjct 666 ACGGTACCTCTAACGGTGTCGTTCCCATGCTCCGTGTCTTCAATAACACTGCTCGCTACG 725 Query 104580 TAAATCAAGCTGGGCGTCGAAAG----GGATCTATCGCAGTCTATCTTGAGCCATGGCAC 104635 | | |||| ||| | | | | || || | || | || || ||||| |||||| Sbjct 726 TCGACCAAGGTGG-CAACAAGCGCCCCGGTGCTTTTGCTATTTACCTCGAGCCTTGGCAC 784 Query 104636 GCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGTGC 104695 || || || | || ||| | || | || ||||| || | ||||||| || | Sbjct 785 GCTGACGTCTTCGACTTCTTGGATCTTCGCAAGAACCATGGCAAGGAGGAGGTCCGCGCC 844 Query 104696 CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGT 104755 ||||| || ||| |||||| ||||| || |||||||||||||||||||| ||| ||| Sbjct 845 CGCGACCTTTTCCTCGCTCTTTGGATCCCCGATCTCTTCATGAAGAGAGTGGAGAAGAAC 904 Query 104756 GGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGA-TGCCGTGGGTGA 104814 || | ||| ||||| | || || || || |||||||| |||| ||| ||| || Sbjct 905 GGAGACTGGACTCTCATGTGCCCCAACGAGTGTCCTGGTCTTGCCGACTGCTACGGG-GA 963 Query 104815 GGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGC--GACGGTG 104872 |||||| || |||| ||| ||||||||| | || || | | | | || ||| | Sbjct 964 GGAGTTCGAGACCCTGTACGAGAAGTACGAGCA-GATGGGCAAGGGTC-GCAAGACCAT- 1020 Query 104873 CCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATA 104931 | || | | | | ||| | || |||||| || |||| |||||||| || | || | Sbjct 1021 CAAGGCCCAAAAGCTCTGGTATGCCATTCTCGAGGCTCAGACCGAGACCGGCAACCCCTT 1080 Query 104932 CATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAA 104991 |||||| ||||| || || |||| ||||| || || ||||| ||||| ||| Sbjct 1081 CATGCTCTACAAGGATGCTGCCAACCGCAAGAGCAACCAGAAGAACCTGGGTACTATCCG 1140 Query 104992 GAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTG 105051 || ||||| ||||| || || ||| | |||| | |||||| ||||| || Sbjct 1141 TAGCTCCAACCTCTGCACTGAGATCATCGAATACTGCGCGCCTGATGAGGTCGCTGTATG 1200 Query 105052 TAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGA-TCCAGAGACAAAGACATTTGATT 105110 |||||| || || |||| || |||| | || || | || || | | | || | Sbjct 1201 TAACCTGGCCTCGCTCGCCCTGCCCACCTTCGTTGACTACAACGAGGGTGTC-TACGACT 1259 Query 105111 ATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATTGATA 105170 | || |||||||| || || | || ||||| |||||| |||| || Sbjct 1260 TCCAGAAGCTCCACGAGGTCACCCAGGTCGTTGTTCGTAACCTCAACAGAATTATCGACG 1319 Query 105171 GAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTC 105230 || ||||| || || ||||| || || ||| | ||||| || ||||||| Sbjct 1320 TCAACCACTACCCGGTCCAGGAGGCTCGCAACAGCAACATGCGCCACCGCCCCATTGGTC 1379 Query 105231 TCGGTGTTCAGGGTCTCGCGGATGTATTCATTCTTTGTCGCCACG-CATTTGATTCCGAC 105289 |||||||||||||||| || |||| ||| || | || || | | ||||| ||| | Sbjct 1380 TCGGTGTTCAGGGTCTTGCCGATGCCTTC-TTGGCTCTCCGCATGCCCTTTGAGTCCCCC 1438 Query 105290 GAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCTT--GAGG 105347 ||||| || |||| | ||||| ||||| || || ||||| || ||| | | Sbjct 1439 GAAGCTCGTGACCTCAACAAGAAGATATTCGAGACAATCTACCACGCTGCCCTTACCATG 1498 Query 105348 CGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTT 105407 || | ||||||| || || ||||| || || || | |||||||| || | || Sbjct 1499 TCGGTGC--AGTTGGCCAGGGAGGAGGGTCCCTACGAGACGTACGAGGGTTCCCCTGTTT 1556 Query 105408 CACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCTTCACTACGACTGGG 105467 | || || | || || | || |||||| | | | || || | || || ||||||| Sbjct 1557 CTCAGGGCATCCTCCAGTACGACATGTGGAATGTTAAGCCCTCGGATCTCTGGGACTGGG 1616 Query 105468 AAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCATGGCTCCAA 105527 | ||||| ||||| | |||||| || | ||| | || ||| ||| || | || || | Sbjct 1617 ATGCTCTGAAGGAGCAGATCAAGCAGCACGGTGTCCGCAACTCTCTGCTTGTCGCGCCCA 1676 Query 105528 TGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACACGA 105587 |||| || ||| |||| | || |||||||| || ||||| ||||| || |||||||| Sbjct 1677 TGCCGACTGCCAGCACCTCTCAGATCTTGGGCAACAATGAGTGCTTCGAGCCCTACACCT 1736 Query 105588 CGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAACAAGCATCTCG 105647 |||| ||||||| | | | ||| || || |||||| | | |||||| ||| Sbjct 1737 CGAATATCTATCAGCGCCGTGTCCTTGCTGGCGAGTTTCAGGTAGTCAACCCTTGGCTCT 1796 Query 105648 TGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAGGATCTCATGGTGAAAG 105707 || | |||||| || || || || |||||| | | ||||||| | | || | | Sbjct 1797 TGAAGGACCTCGTCGATATGGGCCTGTGGTCCGATGCTATGAAGAACCGTATTATTGCCG 1856 Query 105708 CGGGTGGTTCCATTCAAAATATTGTGGATATTCCAAATGAAATTAAGAAGTTGTACCGCA 105767 | ||||| ||||| || || | ||||| | || | || ||||| | Sbjct 1857 AGAACGGTTCTATTCAGAACATCCCCAACATTCCTACCGAGGTCAAAGCACTGTACAAGA 1916 Query 105768 CAGTTTGGGAAATCAAGATGAAGGATGTCATTGACATGGCCGCAGATCGTGGTCGCTTCA 105827 | |||||||||||| | ||| | | ||||| || || |||||| ||||| Sbjct 1917 CCGTTTGGGAAATCTCCCAGCGTACCGTCGTGCAGATGGCTGCCGACCGTGGTGCCTTCA 1976 Query 105828 TTGATCAAAGTCAAAGT--ATGAATCTCTTCATGGAAAGTCCAACGATGTCCAAGCTCTC 105885 | || | |||| ||| | || || |||| | ||||| ||| |||| || | Sbjct 1977 TCGACC--AGTCGCAGTCGCTTAACATCCACATGAAGGACCCAACTATGGGCAAGATCAC 2034 Query 105886 TTCTATGCACATGTACAGTTGGAAGAAGGGTCTCAAAACGGGGATGTATTACCTCCGATC 105945 |||||| | |||||||| ||||| || ||||| ||||| ||||| || | Sbjct 2035 CAGCATGCACTTCGCTGGTTGGAAGCTCGGTCTGAAGACGGGCATGTACTACCTGCGCAC 2094 Query 105946 TAAGGC-AAAGGCGCGCCCAATTCAGTTCA 105974 |||| | ||||||| || ||||||| Sbjct 2095 GCAGGCTGCTGCCGCGCCC-ATCCAGTTCA 2123 >seq90 Length=51520 Score = 149 bits (164), Expect = 7e-31 Identities = 169/225 (75%), Gaps = 9/225 (4%) Strand=Plus/Minus Query 94723 GCCATCCAAACAGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTT--- 94779 |||||| |||||||| || |||| ||||| || || |||||| | |||||| || Sbjct 5470 GCCATC---ACAGTTCCTTGCATTCGTAAGAAGGCCGACTGGGCTCTCAAGTGGATTAGC 5414 Query 94780 GATACAAAGTCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATC 94839 ||| ||||| ||||| || |||| || | ||||| || || |||||||| Sbjct 5413 GATGAGAAGTCC---TCCTTCGCCCAGCGCCTGGTTGCATTCGCTGCCGTCGAGGGTATT 5357 Query 94840 TTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGT 94899 |||||| ||| |||| | |||| | |||||||||||||| ||||||||||| ||| Sbjct 5356 TTCTTCAGTGGCGCCTTTGCCTCTATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCCGGT 5297 Query 94900 CTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCAC 94944 || ||||||||| ||||||||||||||||||||||| || ||| Sbjct 5296 CTGACCTTCTCCAATGAGCTTATCTCTCGTGACGAGGGTCTGCAC 5252 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583199156624200