Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20graminicola_20[genbank_20GCA_5F001951205.1_202017-
01-13] 8,455 sequences; 59,914,086 total letters
Query= NC_031033.1
Length=217124
Score E
Sequences producing significant alignments: (Bits) Value
seq1012 123 3e-23
>seq1012
Length=16087
Score = 123 bits (136), Expect = 3e-23
Identities = 381/587 (65%), Gaps = 12/587 (2%)
Strand=Plus/Minus
Query 77955 CCAGGGCATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCATA 78014
||||| || || || |||||||| | | |||||| || | | || |||| |||||
Sbjct 942 CCAGGACACTCGTTGGGGCACATGAGAGTCCAGTCTCCGTTCTTCTCCACTCTCTTCATG 883
Query 78015 AAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCT 78074
|||||||| || ||||| ||||| | || || || |||| | || || || ||
Sbjct 882 AAGAGATCGGGGATCCAAAGAGCGAGGAAAAGGTCGCGGGCGCGGACCTCCTCCTTGCCA 823
Query 78075 GTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATT 78134
||||| |||||| | || || | | |||| ||||| || || || || ||
Sbjct 822 TGGTTCTTGCGAAGATCCAAGAAGTCGAAGACGTCAGCGTGCCAAGGCTCGAGGTAAATA 763
Query 78135 GCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAA 78194
|| | | | || || || || || || || || || | || | || |||||||| |
Sbjct 762 GCAAAAGCACCGGGGCGCTTGTTGCCACCTTGGTCGACGTAGCGAGCAGTGTTATTGAAG 703
Query 78195 ACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCA 78254
|| | | ||| |||| | ||||||||| || || || || |||| ||| ||| ||
Sbjct 702 ACACGGAGCATGGGAACGACACCGTTAGAGGTACCGTTGGTGCCAGCAATGTAAGAGCCG 643
Query 78255 CTTGCGCGAATAT--TACTAATGGATATCCCTATTCCTCCTGCCATCTTAGATATTAGAG 78312
| ||||| || | || || | || || || || ||||| || || || | ||
Sbjct 642 GTAGCGCGGATGCGGTGGACATTGAGA--CCAATGCCACCGGCCATTTTGGAGATCATAG 585
Query 78313 CGCAACGTTTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCATGTTAAGAAGAA 78372
|||| || | || |||||||||||||| ||| ||| ||| |||| | | ||| |
Sbjct 584 CGCAGGTCTTGAGGGTGTCGTAGATACCCTCGATAGAGTCCTCCTTCATATCGACAAGGA 525
Query 78373 AACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAATAATGTCGGAGATGCATGCG 78432
| || |||| ||| ||| || || || || || | || ||||| || || |
Sbjct 524 AGCAAGAGGACAGCTGAGCCTGAGGGGTGCCGGCGTTGAAGAGCGTAGGAGAGGCGTGAG 465
Query 78433 TAAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAGCTGATTCTATGTC----CCAT 78488
|||| | || || | || ||||| ||||| || | ||| | ||| ||
Sbjct 464 TAAAGAACTTGCTCGACATCAGGTTGTAGGTTTCGATGACGCGTTCAACGTCATCGCCCC 405
Query 78489 TGATGAATTCCTACCGCTACACGCATCAACATATGCTGAGGTCTTTC 78535
|||| || || || |||||||| | ||| ||||||||||| ||
Sbjct 404 AGATG----CCCACAGCGACACGCATGATCATGTGCTGAGGTCTCTC 362
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694595382191200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |