Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20higginsianum_20[genbank_20GCA_5F000313795.2_202012-
03-15] 10,235 sequences; 49,084,868 total letters
Query= NC_003529.1
Length=155060
Score E
Sequences producing significant alignments: (Bits) Value
seq7566 84.2 2e-11
>seq7566
Length=2327
Score = 84.2 bits (92), Expect = 2e-11
Identities = 146/215 (68%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 139550 CGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAG 139609
|||| || | ||| | || ||||| || || ||||| || ||| | |||| |
Sbjct 1451 CGCAGGACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCG 1392
Query 139610 TCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 139669
|| |||||||| || || || |||||| || ||||| ||||| || || || || |||
Sbjct 1391 TCCTCGAGCTGCTTGCCRGCGAAGATCAARCGCTGCTGGTCGGGRGGGATACCCTCCTTG 1332
Query 139670 TCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACC 139729
|| ||| || || | | || | ||||||| | ||||||||||| ||| |
Sbjct 1331 TCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGGARGACTCCACCTCAAGGGTGATA 1272
Query 139730 GTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764
||||| || || | || || ||||| || |||||
Sbjct 1271 GTCTTACCCGTGAGGGTCTTCACGAAGATCTGCAT 1237
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496000534812000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |