Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20higginsianum_20[genbank_20GCA_5F000313795.2_202012- 03-15] 10,235 sequences; 49,084,868 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq3288 84.2 1e-11 >seq3288 Length=4615 Score = 84.2 bits (92), Expect = 1e-11 Identities = 136/193 (70%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 25782 GTACTCTGCTCCGAAATACCTCCACTGGAACCCGTACACCGGTCCTAGGTCTCC-ATCTT 25840 |||||| || ||||||| |||||| ||||| |||||||| || || ||||| || |||| Sbjct 785 GTACTCGGCGCCGAAATGCCTCCATTGGAAGCCGTACACGGGGCCGAGGTCGCCGATCT- 727 Query 25841 CCCTGTGCTCAAAGCCCCTCTTATCCAAAAAGTCTCTGGAACCATTGGCGTCCCAGATCT 25900 | | |||| | ||| | || | || || | || || ||| |||||||||||| Sbjct 726 CGCGGTGCGTGAGGCCGACGCTGTCTAGGAACTCCCGCGAGCCGTTGCCGTCCCAGATCT 667 Query 25901 TTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCT 25960 | || ||| |||| || | ||| |||| ||| || |||||||||||||| Sbjct 666 TGACGCCCGCCTCGCTCAGGGCGAGAGAGGATGTGTTGCCTTCGATGAACCACAGCAGCT 607 Query 25961 CCGCCGTGACGGC 25973 | || ||||||| Sbjct 606 CGGCGATGACGGC 594 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 340095171554655