Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20higginsianum_20[genbank_20GCA_5F000313795.2_202012-
03-15] 10,235 sequences; 49,084,868 total letters
Query= NC_006549.1
Length=140131
Score E
Sequences producing significant alignments: (Bits) Value
seq7566 86.0 6e-12
>seq7566
Length=2327
Score = 86.0 bits (94), Expect = 6e-12
Identities = 149/219 (68%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA 94852
|||| |||| ||| | || || ||||| || | ||| || ||| | ||| |
Sbjct 1451 CGCAGGACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCG 1392
Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912
||||| ||||| || || | ||||| || | ||||| || || || ||||| || |||
Sbjct 1391 TCCTCGAGCTGCTTGCCRGCGAAGATCAARCGCTGCTGGTCGGGRGGGATACCCTCCTTG 1332
Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972
|| | || || | |||||| | ||| ||||| | || || |||| |||||
Sbjct 1331 TCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGGARGACTCCACCTCAAGGGTGATA 1272
Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGCTT 95011
|| || || || || || ||||| |||||||||||| ||
Sbjct 1271 GTCTTACCCGTGAGGGTCTTCACGAAGATCTGCATGATT 1233
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448233846744600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |