Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20higginsianum_20[genbank_20GCA_5F000313795.2_202012-
03-15] 10,235 sequences; 49,084,868 total letters
Query= NC_009899.1
Length=344691
Score E
Sequences producing significant alignments: (Bits) Value
seq3410 95.1 3e-14
>seq3410
Length=4507
Score = 95.1 bits (104), Expect = 3e-14
Identities = 137/191 (72%), Gaps = 2/191 (1%)
Strand=Plus/Minus
Query 243566 TTGGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTCA 243625
||||||||||||| | | ||| |||||||| || ||||| ||||||||| || |
Sbjct 1892 TTGGCATGAACTCCAACTTGATGAAGCAGTACATTGAGTTCGTCGCCGACCGCCTTCTGG 1833
Query 243626 TCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAGCTCA 243685
| || ||||| | || || || ||||| || |||||||| | ||| |||||| ||
Sbjct 1832 TTGCTCTTGGCAACGACAAGGTCTACAAGTCTTCCAACCCCTTCGACTTCATGGAGAACA 1773
Query 243686 TTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGTGATTATCA-ACGCCCT 243744
| || || || || || |||||||| || |||||||| ||| || || | | ||
Sbjct 1772 TCTCCCTGGGCGGCAAGACCAACTTCTTTGAGAAGCGTGTTGCTGACTACCAGAAGGCC- 1714
Query 243745 GGTGTGATGAA 243755
||||| |||||
Sbjct 1713 GGTGTCATGAA 1703
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1102735372797250
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |