Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20higginsianum_20[genbank_20GCA_5F000313795.2_202012-
03-15] 10,235 sequences; 49,084,868 total letters
Query= NC_010191.2
Length=186713
Score E
Sequences producing significant alignments: (Bits) Value
seq2519 215 6e-51
seq3410 98.7 1e-15
>seq2519
Length=5298
Score = 215 bits (238), Expect = 6e-51
Identities = 943/1476 (64%), Gaps = 31/1476 (2%)
Strand=Plus/Minus
Query 113915 AACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGGCTCAAAGCACTCA 113974
||||| || || ||| || | | | ||||| || | ||||| |||||||| |||||
Sbjct 3273 AACTCGCCAGCAAGGACACGGCGCTGGTAGATGTTTGAGGTGTAGGGCTCAAAACACTCG 3214
Query 113975 TTGTTACCCAAGATTTGGGCGGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTA 114034
||||| |||||||| || | ||| ||| || |||||||| || | ||| || |||
Sbjct 3213 TTGTTGCCCAAGATCTGCGAAGTGCTGGCAGTCGGCATGGGCGCGACGAGCAGAGAGTTG 3154
Query 114035 CGGAGACCCTTTTCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCGTAGTTGAGCTTTGTC 114094
|||| ||| | | | | || | ||||| || | ||||||||| || | | | |
Sbjct 3153 CGGACACCGTGCTGCTTGATCTGCTCCTTCAGAGAGTCCCAGTCCCAGAGGTCCGAAGGC 3094
Query 114095 TCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGAGGCTGGCGATCCCTCAAATGTC 114154
| | | |||||| ||| |||| ||||| || |||||| | ||||| ||||| | |||
Sbjct 3093 TTGACATTCCACATGTCATACTGAAGGATGCCCTGGGAGACAGGCGAGCCCTCGTACGTC 3034
Query 114155 TCGTATGGGCCCTCAACCTCCGCCAATT---CGGAGCTCGCCTCGAGGGCTGCGTGATAC 114211
| |||||||||||| | | |||| | | || | | |||||| ||||| ||
Sbjct 3033 TGGTATGGGCCCTCCTCTTTAGCCAGCTGCACAGACATGG---TGAGGGCAGCGTGGTAG 2977
Query 114212 ATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGG 114271
|| ||||| || || || | | ||| ||| || || || | | ||
Sbjct 2976 ATGGTCTCGAAGATCTTCTTGTTGAGGTCGCGGGCTTCGGGAGACTCGAAGGGCATGCGA 2917
Query 114272 CACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATA 114331
| || |||| || ||||| || |||||||||||||| ||||| || | |||
Sbjct 2916 AGAGCCAGGAAAGCATCGGCAAGACCCTGCACACCGAGGCCAATGGGGCGGTGGCGCATG 2857
Query 114332 TTAGACTTTCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTT 114391
||| || ||||| | ||||| ||| || ||||| | || || || ||
Sbjct 2856 TTACTGTTGCGAGCCTCTTGAACGGGGTAATGGTTGACGTCGATGATTCTGTTCAGGTTG 2797
Query 114392 TTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCA 114451
||||||| || | || || ||||| | | | || | | | ||| |
Sbjct 2796 CGAACAACAACCTGGGTCACCTCGTGGAGCTTCTGGAAGTCGTA---GACACCCTCGTTG 2740
Query 114452 TTG---ACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTA 114508
| | ||| | | ||||| |||| || ||||| || || |||| | ||| || |
Sbjct 2739 TAGTCAACAAAAGTGGGAAGTGCGAGCGAGGCCAGGTTGCAGACAGCGACCTCGTCAGGA 2680
Query 114509 TCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTT 114568
| |||||| || || || || |||| || || || |||||| || | ||||||
Sbjct 2679 GCGCAGTACTCAATGATCTCAGTGCACAGGTTAGAGCTGCGAATGGTACCAAGGTTCTTC 2620
Query 114569 TGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTT 114628
|| || ||| ||| ||||||||||| |||||| | || | || ||||| ||
Sbjct 2619 TGGTTGCTCTTGCGGTTGGCGGCATCCTTGTAGAGCATGAAGGGGTTGCCAGTCTCGGTC 2560
Query 114629 TGGGACTTGAGAATAGCCTTCCAGA-CATCGGCGGCTGGCACAG--TGGCGTTGGCTCGC 114685
|||| || || ||||| | ||||| | || | | || || | | ||| | || ||
Sbjct 2559 TGGGCCTCAAGGATAGCATACCAGAGCTTCTGAGCCT-TCATGGTCTTGCG-TCCCTTGC 2502
Query 114686 CCCTCCTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGC 114745
|| | || |||||||| || | ||| |||||||| || || | || | |
Sbjct 2501 CCAT-CTGTTCGTACTTCTCATACAAGGCCTCAAACTCCTCGCCGTAGCAGTCGGCCAAG 2443
Query 114746 CCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACACGCTTCATG 114805
|| || || || ||||| | |||| ||| | || || ||| || | |||||||
Sbjct 2442 CCCGGGCACTCATTGGGGCACATAAGAGTCCAGTCTCCGTTCTTCTCGACTCTCTTCATG 2383
Query 114806 AAGAGGTCTGGGATCCAGAGAGCTGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCC 114865
||||| || || |||||||| || ||||| || ||| ||| | || || | ||
Sbjct 2382 AAGAGATCGGGAATCCAGAGGGCAAGAAAGAGGTCACGAGCGCGGACCTCCTCCTTTCCG 2323
Query 114866 TGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACC 114925
||||| |||| ||||| ||||| | || || |||||||| || || ||||| |
Sbjct 2322 TGATTCTTGCGCAGATCCAAGAAGTCGAAGACGTCGGCGTGCCAAGGCTCAAGGTAGATG 2263
Query 114926 GCGATTGACCCCTTACG---ACGACCAGCCTGGTTTACATACCTCGCTGTGGCATTAAAT 114982
|| | | || ||| |||| |||||| || || | || ||| || ||
Sbjct 2262 GCAAAGGCACCGGGACGCTTGTTACCACCCTGGTCAACGTAGCGAGCCGTGTTGTTGAAG 2203
Query 114983 ACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGTCCCCCGAA--TACGAGACT 115040
|| |||||||| || | | |||| || ||||| || || || || ||| |
Sbjct 2202 ACACGAAGCATAGGGACAACGCCATTGGAGGTACCATTGGTGCCGGCAATGTAGGAGCC- 2144
Query 115041 TATTGGCTCTGACATCATGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCG 115100
| |||| | | || | | || || ||||| || ||| ||| ||||| |
Sbjct 2143 -AGTGGCACGAATGCGGTGAACATTCAGGCCGATACCACCGGCCATCTTGGAGATCATGG 2085
Query 115101 CGCACTCCGTGAGACTGCCGTAGATCCCGTCGATCGAGTCACCCTTATTTGCGATAAGGA 115160
|||| | |||| || | ||||| || ||||| || || |||| | ||| ||||
Sbjct 2084 CGCAAGTCTTGAGGGTGTCATAGATACCCTCGATGGAATCTTCCTTCATGTCGACGAGGA 2025
Query 115161 AGCAGCTCGACATTTGTGGCCT-TGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGG 115219
||||| || | || ||||| ||| ||||||||||||||||| || || | |||||
Sbjct 2024 AGCAGGAGGATAGCTG-GGCCTGTGGGGTACCAGCGTTGAAGAGTGTGGGAGAGGCGTGC 1966
Query 115220 ATGAACATACCTTG--GGACATCTTATCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCC 115277
||| | | |||| ||||||| | |||||| || | |||| || ||| || |
Sbjct 1965 GTGA--AGAACTTGCTGGACATCAAGTTGTAGGTTTCGATGACGCGCTCAACGTCGTCAC 1908
Query 115278 CGTGAATACCGATCGAGACCCGCATAAACATGTATTGGGGTGTTTCCATCAGGATACCAT 115337
| || || | | ||| ||||| | ||||| ||| || | || | | || |
Sbjct 1907 CCCAGATGCCAACGGCGACACGCATGATCATGTGTTGCGGCCTCTCAGCGATCTTGCCGT 1848
Query 115338 CGAGCCTCTGGAGGTAACTCTTCTCCAAGGTCTTGA 115373
| ||| | ||||||| |||||||||| ||||
Sbjct 1847 CAAGCTTGAGGAGGTATGATCTCTCCAAGGTTTTGA 1812
>seq3410
Length=4507
Score = 98.7 bits (108), Expect = 1e-15
Identities = 154/218 (71%), Gaps = 8/218 (4%)
Strand=Plus/Plus
Query 126058 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACC 126117
|||||| ||||| ||||| |||||||| || || |||||| ||| || |||||||||||
Sbjct 2023 GTGGAGTCCCTCATCACGAGAGATGAGCTCGTTGGAGAAGGTCAGGCCGGGCATGAGACC 2082
Query 126118 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACACA 126177
|||||||| | |||||| || | || | ||| ||||||||| ||||| ||
Sbjct 2083 ACGCTTCTTGAGCCAGAAGATGGACGCGAAGGCACCGCTGAAGAAGATACCCTCAACGGC 2142
Query 126178 CGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGT----GTCAAACCACTTCA 126233
||||| || | ||||||| || || || || ||| | || || |||||| |
Sbjct 2143 GGCGAAAGCGACCAGACGCTGGGCGAATGA---AGA-TTTCTCATCGTTAATCCACTTGA 2198
Query 126234 TCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTC 126271
||||| | |||||||| ||||| || || |||
Sbjct 2199 GAGCCCAGTCGGCCTTTTTACGAATACAGGGAACTGTC 2236
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 597277176073800
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