Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20higginsianum_20[genbank_20GCA_5F000313795.2_202012-
03-15] 10,235 sequences; 49,084,868 total letters
Query= NC_016072.1
Length=1259197
Score E
Sequences producing significant alignments: (Bits) Value
seq5440 96.9 3e-14
>seq5440
Length=3227
Score = 96.9 bits (106), Expect = 3e-14
Identities = 109/146 (75%), Gaps = 0/146 (0%)
Strand=Plus/Plus
Query 550391 GTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACT 550450
|||| | | || || | || || || || || || || ||||| || ||||| |||||
Sbjct 1738 GTTAAGAACGCTGTCGTTACCGTTCCTGCCTACTTCAACGACTCCCAGCGTCAGGCTACC 1797
Query 550451 AAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCT 550510
|| |||||||| | ||||| || || || ||||| ||| | ||||||| |||||||||
Sbjct 1798 AAGGATGCTGGTCAGATTGCCGGCCTGAACGTTCTCCGTGTCGTCAATGAGCCTACTGCT 1857
Query 550511 GCTGCACTTGCATATGGACTTGATAA 550536
||||| || || ||||| || || ||
Sbjct 1858 GCTGCTCTGGCCTATGGTCTGGAGAA 1883
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 4028754727040150
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |