Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20higginsianum_20[genbank_20GCA_5F000313795.2_202012-
03-15] 10,235 sequences; 49,084,868 total letters
Query= NC_021924.1
Length=129052
Score E
Sequences producing significant alignments: (Bits) Value
seq8289 107 2e-18
>seq8289
Length=2061
Score = 107 bits (118), Expect = 2e-18
Identities = 200/294 (68%), Gaps = 0/294 (0%)
Strand=Plus/Plus
Query 34318 TCAGTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCAAGC 34377
|| ||||| ||||| | || | | || | || |||||| |||||| || || ||
Sbjct 277 TCGGTCTCAGGGTTCTTGCACTTCTTGCAAAGAACGAACTTGTTGATGAAGCCGTCGAGG 336
Query 34378 AGGTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTTGTAA 34437
|||| || | ||| ||| | |||||||||||||| ||| | || |||| |
Sbjct 337 TGGTCTTGCAGCTTGGCGGCATTGTGGGAGCCGTTGATGATCCAGCGGTCGTCGGCGGGG 396
Query 34438 TCGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAATGGCCGGA 34497
||||| | || || || || |||||| | || |||||||| | || | | |||
Sbjct 397 TCGACGTTGGTCTGGGCACCGAGCTCGAAGCCAAAGTACTTGATGACATAGGCGCCGGGA 456
Query 34498 CGTCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGTTGCCC 34557
|| | || | || |||| | || ||||||| ||| ||||||||||||||||||
Sbjct 457 CGGGCGAGGGACTGAGCGACACTGCTCAGATTGACGACGACGGTCTTGATGCCGTTGCCC 516
Query 34558 TTTCCTTCGACCTTGGCGCAGATGCGCGGCATTTTGTAGCGGTAGAACGCGTCC 34611
|| || |||| ||||| | ||| | ||| ||||| || ||||| ||||||
Sbjct 517 TTGCCCTCGATCTTGGTGACGATCTTCTCCATCTTGTAACGATAGAAGGCGTCC 570
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 412790102525855
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |