Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20higginsianum_20[genbank_20GCA_5F000313795.2_202012-
03-15] 10,235 sequences; 49,084,868 total letters
Query= NC_029997.1
Length=105667
Score E
Sequences producing significant alignments: (Bits) Value
seq7566 98.7 7e-16
>seq7566
Length=2327
Score = 98.7 bits (108), Expect = 7e-16
Identities = 141/198 (71%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| ||||| || ||||||||||| || || ||||| || || || || || |
Sbjct 1237 ATGCAGATCTTCGTGAAGACCCTCACGGGTAAGACTATCACCCTTGAGGTGGAGTCYTCC 1296
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
||||| | || ||| | || | || || ||||| || ||| | || || || ||
Sbjct 1297 GACACCATCGACAATGTCAAGTC-CAAGATCCAGGACAAGGAGGGTATCCCYCCCGACCA 1355
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
||||| || || || || ||||| || || || |||| ||||| | ||| |||||
Sbjct 1356 GCAGCGYTTGATCTTCGCYGGCAAGCAGCTCGAGGACGGCCGCACCCTCTCCGACTACAA 1415
Query 23790 CATACAAAAAGAGTCCAC 23807
||| || || ||||||||
Sbjct 1416 CATCCAGAAGGAGTCCAC 1433
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 337967436999380
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |