Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20higginsianum_20[genbank_20GCA_5F000313795.2_202012- 03-15] 10,235 sequences; 49,084,868 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq7566 120 7e-22 >seq7566 Length=2327 Score = 120 bits (132), Expect = 7e-22 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 ||||| || || || || ||||| || ||||||||||| |||| | || | || || Sbjct 1448 AGGACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCC 1389 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || || |||||||| | | ||||||||| | | ||| || ||||| || Sbjct 1388 TCGAGCTGCTTGCCRGCGAAGATCAARCGCTGCTGGTCGGGRGGGATACCCTCCTTGTCC 1329 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 || || || |||||| | || | | |||| || ||| || ||||| || ||||| Sbjct 1328 TGGATCTTGGACTTGACATTGTCGATGGTGTCGGARGACTCCACCTCAAGGGTGATAGTC 1269 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || |||||||| ||||||||||||| |||||| Sbjct 1268 TTACCCGTGAGGGTCTTCACGAAGATCTGCAT 1237 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153669492627685