Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20incanum_20[genbank_20GCA_5F001625285.1_202016-04- 19] 2,896 sequences; 53,597,417 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq1484 96.9 7e-15 >seq1484 Length=366709 Score = 96.9 bits (106), Expect = 7e-15 Identities = 112/150 (75%), Gaps = 6/150 (4%) Strand=Plus/Plus Query 94407 CTCATATTTCTCGTACAACGCCTTAAACTCTTCGCCATGGACGTCGGAAAGGCCAGGGCA 94466 ||| || ||||||||||| |||| ||||| ||||| | | ||||| ||||||||||| Sbjct 274156 CTCGTACTTCTCGTACAAGGCCTCGAACTCCTCGCCGTAGCAGTCGGCCAGGCCAGGGCA 274215 Query 94467 CTCGTGGGGGCACATCAGGGACCAATTCTTCCCAGCCTTC---ACTCTCTCCATGAAGAG 94523 ||||| ||||||||| || | ||| | ||| |||| || |||| ||||||||| Sbjct 274216 CTCGTTGGGGCACATGAGAGTCCA---GTCCCCGTTCTTCTCTACCCTCTTCATGAAGAG 274272 Query 94524 ATCAGATACCCAGATAGCTGGGAAAAGATC 94553 || | | ||||| ||| ||||||| || Sbjct 274273 GTCGGGAATCCAGAGAGCGAGGAAAAGGTC 274302 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989547281485680