Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20incanum_20[genbank_20GCA_5F001625285.1_202016-04-
19] 2,896 sequences; 53,597,417 total letters
Query= NC_023442.1
Length=120420
Score E
Sequences producing significant alignments: (Bits) Value
seq2064 93.3 3e-14
>seq2064
Length=287033
Score = 93.3 bits (102), Expect = 3e-14
Identities = 163/232 (70%), Gaps = 4/232 (2%)
Strand=Plus/Minus
Query 29557 TGTCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATC- 29615
|| ||||| | || ||| || || | |||||||| || || || || ||||| || ||
Sbjct 186705 TGACCTCCACGCAGACGGAGGACAAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCA 186646
Query 29616 CGCAATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGG 29675
| ||| |||||| ||| || | || |||||||| | || | | |||||||| ||
Sbjct 186645 CTCAA-GGTGCGGCCATCCTCCAACTGCTTGCCAGCGAAAATGAGACGCTGCTGATCGGG 186587
Query 29676 CGGAATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTT 29734
||||||||||| ||||| || ||| || | ||||| | || | ||||| ||| |
Sbjct 186586 AGGAATACCCTCCTTGTCCTG-AATCTTCGACTTGACGTTGTCAATCGTGTCCGAAGACT 186528
Query 29735 CTACTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
| || || || || || || || || || || || || || || ||||||||
Sbjct 186527 CGACCTCTAGTGTGATCGTCTTTCCGGTCAAAGTCTTGACGAAGATCTGCAT 186476
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 385205603688336
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |