Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20incanum_20[genbank_20GCA_5F001625285.1_202016-04-
19] 2,896 sequences; 53,597,417 total letters
Query= NC_025257.1
Length=102759
Score E
Sequences producing significant alignments: (Bits) Value
seq1255 96.9 2e-15
>seq1255
Length=235273
Score = 96.9 bits (106), Expect = 2e-15
Identities = 149/210 (71%), Gaps = 2/210 (1%)
Strand=Plus/Minus
Query 33541 ACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCC 33600
||||| || ||||| ||| || || |||||||| |||||||| ||||| |||| ||
Sbjct 166442 ACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCG 166383
Query 33601 AATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCA 33660
| || ||||| || || |||| |||||||| || | || | || || |||||
Sbjct 166382 AGCTGCTTTCCAGCGAAGATCAGGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGG 166323
Query 33661 ATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTT 33719
|| || || | ||| ||| | ||||||| || ||||| |||| ||||| || ||
Sbjct 166322 ATCTTGGACTTGA-CATTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATAGTCTT 166264
Query 33720 ACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
||| || | || || || |||||||||||
Sbjct 166263 ACCCGTGAGGGTCTTGACGAAGATCTGCAT 166234
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 328692398392320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |