Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20incanum_20[genbank_20GCA_5F001625285.1_202016-04-
19] 2,896 sequences; 53,597,417 total letters
Query= NC_030842.1
Length=115510
Score E
Sequences producing significant alignments: (Bits) Value
seq1396 91.5 1e-13
>seq1396
Length=452294
Score = 91.5 bits (100), Expect = 1e-13
Identities = 159/227 (70%), Gaps = 6/227 (3%)
Strand=Plus/Plus
Query 27499 TACTCTGCTCCGAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCC 27558
||||| || || || || | ||||||||| ||||| || || || ||||| || ||||
Sbjct 169404 TACTCGGCGCCAAAGTGTCGCCATTGGAAACCGTAGACAGGGCCGAGGTCGCCGACTTCG 169463
Query 27559 CTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTT 27618
| ||| || ||| |||| | || || | || |||||| |||||||||||||
Sbjct 169464 CGATGCGAGAGGCCAACGCTGTCAAGGAACTCACGTGAGCCGTTGCCGTCCCAGATCTTA 169523
Query 27619 ACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTG-GACCCTCTGACGAACCACAGCAGCTC 27677
|| || |||| || | |||| |||| ||||| ||||||||||||||||||
Sbjct 169524 ACGCCTGCCTCGCTCAGTGCGAGGGAGGATGTGTTGCCCTC-GACGAACCACAGCAGCTC 169582
Query 27678 CTCCACGACGGCCTTCCAA--AAGACCCTCTTGGTCGTGAGGAGGGG 27722
| | |||||| | || ||||| | ||| || || ||||||||
Sbjct 169583 GGCGATGACGGC--GCGAAGGAAGACGCGCTTCGTGGTAAGGAGGGG 169627
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 369494158243376
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |