Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20incanum_20[genbank_20GCA_5F001855235.1_202016-10- 27] 1,036 sequences; 53,254,579 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq431 181 1e-40 seq120 131 2e-25 seq456 120 3e-22 seq154 107 2e-18 >seq431 Length=114165 Score = 181 bits (200), Expect = 1e-40 Identities = 965/1513 (64%), Gaps = 49/1513 (3%) Strand=Plus/Minus Query 145058 TTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAGGGT 145117 ||||||||||| ||||| || || | ||||| ||| || | ||| || ||| |||| Sbjct 110572 TTGACGACCTGGAACTCACCAGCAAGAACACGTCGCTGGTAGATGTTGGAGGTGTAGGGC 110513 Query 145118 TCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCCACC 145177 ||||| ||||||| ||||||| ||| || | ||| | || || |||||| ||| || Sbjct 110512 TCAAAGCACTCGTTGTTGCCCAAGATCTGCGAGGTGCTAGCAGTCGGCATGGGCGCGACG 110453 Query 145178 AATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTA--GCGTACCCCAATCCC 145235 | | || ||||| | ||||||| |||||| | ||||| | |||| |||| |||| Sbjct 110452 AGAAGAGAGTTGCGGACACCGTGCTGCTTGATCTGCTCCTTCAAAGCGT--CCCAGTCCC 110395 Query 145236 ATAGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCCTCGCTGGCGGGGC 145295 | || | ||| | || | ||||||||||||||| | ||||||| | ||||| Sbjct 110394 AGAGATCCGAGGGCTTGACATTCCACATGTCGTACTGGAGGATGCCCTGAGAGACGGGGG 110335 Query 145296 TGCCTTGAAAGGAACTGTAACTGCCCCAAGTTTTGGCGAGCTCGCAACTCGCCTCCAGAG 145355 || | | | ||| |||| ||||| |||| || || | | ||| Sbjct 110334 AACCCTCGTACGTCTGGTAGGGGCCCTCCTCCTTGGCCAGCT-GC-ACCGACATGGTGAG 110277 Query 145356 CGC--CGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGCATCGCTTCATCGCTCTC 145413 || || || || ||||| || | | |||| || || ||| ||| Sbjct 110276 GGCAGCGTGGTAGATGGTCTCAAAGATCTTCTTGTTTAGGTCGCGAGCCTCAGGAGACTC 110217 Query 145414 GTACGGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGTATTCCCACGCCGATGGG 145473 | | ||||||||||| | || ||||| || || ||||| | || | || ||||| Sbjct 110216 GAAGGGCATGCGCAGAGCCAGGAAGGCATCAGCAAGACCCTGGACACCGAGACCAATGGG 110157 Query 145474 CCGATGTTTCATGTTGCTCATCCTCGCCGACTCGATAGGATATCGATTACGGTCGATAAT 145533 || || ||||||||| | | ||| || | ||| || | || |||||| || Sbjct 110156 GCGGTGACGCATGTTGCTGTTGCGAGCCTCCTGAACAGGGTAGTGGTTGACGTCGATGAT 110097 Query 145534 TTTATTCAAGTTTCGCACTACTACCTTTGTAATGTGCCGCAACTTTTCAAAGTCAAACCG 145593 | | |||| ||| || || || |||| || | | | | ||| | ||||| | Sbjct 110096 TCTGTTCAGGTTGCGGACAACAACCTGGGTGACCTCGTGGAGCTTCTGGAAGTCGTAGAC 110037 Query 145594 AGCCTCGTCAACGACCACACAGCTATTGACGGCGATCGACGCCAAATTACAAACTGCCGT 145653 |||||| | | ||| || | | ||||| ||| |||| || || || || Sbjct 110036 GCCCTCGTTGTAGTCAACAAAGGTGGGCAAGGCGAGCGAGGCCAGGTTGCAGACCGCGAC 109977 Query 145654 CTCCTC-GGCGTCGCTGTATTGTACGATCTCGGCGCACAAATTGCTACATTTGATGGTTC 145712 ||| || |||| ||| ||| | | |||||| | ||| | ||| | |||||| | Sbjct 109976 CTCATCAGGCG-CGCAGTACTCGATGATCTCCGTGCAGAGGTTGGAGCTGCGGATGGTGC 109918 Query 145713 CCAGATTTTGCTGATTACTTTTCCTGTTGCACGCGTCCTTGTAGAGCATGTACGGTCCGC 145772 | || || | ||| || || || | |||| || ||||||||||||||| | || || Sbjct 109917 CAAGGTTCTTCTGGTTGCTCTTGCGGTTGGCGGCATCCTTGTAGAGCATGAAAGGGTTGC 109858 Query 145773 CAGTCTCCACCTGCGTCTCCACGAT---AAAACGGTGCAAGTCCTGCGCACGCACCTGCT 145829 ||||||| ||| | ||| | ||| | | | | || | ||| || || || | Sbjct 109857 CAGTCTCGGTCTGGGCCTCGAGGATGGCATACCAGAGC---TTCTGGGCCTTCA--TGGT 109803 Query 145830 GCTGGTAGC---GGCCCTCTTCTTCGTATTTCCTGTAGAGCTCCTCAAACGCGGAACCGT 145886 || | | | || ||| | ||||| ||| ||| | |||| ||| | |||| Sbjct 109802 CTTGCGACCCTTGCCCATCTGC-TCGTACTTCTCGTACAAGGCCTCGAACTCCTCGCCGT 109744 Query 145887 AGCAATCGGACAGGCCGGGACACTTGTTGGGACACATCAGCGACCATACGCCGTTGGCGT 145946 |||| |||| |||||| || |||| |||||| ||||| || | ||| | ||||| | Sbjct 109743 AGCAGTCGGCCAGGCCAGGGCACTCGTTGGGGCACATGAGAGTCCAGTCCCCGTTCTTCT 109684 Query 145947 TGACGCGCTCCATAAACAAATCTGGCACCCACAGCGCGTACATCAAGTCGCGCGCTTTGC 146006 || | || ||| || | || || | ||| || ||| | | ||| || || | Sbjct 109683 CTACCCTCTTCATGAAGAGGTCGGGAATCCAGAGAGCGAGGAAAAGGTCACGGGC---AC 109627 Query 146007 AATCCTCAGC--ACCCATGTTTC--GCTTCAAAT-TAAGCACACTATAGATGTCCGCGTG 146061 | |||| | || || ||| || || || ||| | | | ||| || ||||| Sbjct 109626 GAACCTCCTCCTTGCCGTGGTTCTTGC-GCAGATCCAAGAAGTCGA-AGACATCGGCGTG 109569 Query 146062 CCACGGTTCAATATAGACGGCGAGGGCTCCTTTTCGT---TTGCCACCCTGGTCCACGTG 146118 ||| || |||| |||| ||||| || || ||| |||||||||||||| |||| Sbjct 109568 CCAAGGCTCAAGGTAGATGGCGAAAGCACCCGGGCGTTTGTTGCCACCCTGGTCGACGTA 109509 Query 146119 ACGTACCATGTTGTTAAAGACGCGCACCATGGGCTCGACGCCGCTGGCTACGCCGTTCGT 146178 || | ||||||| ||||| || | |||||| |||| ||| | | ||||| || Sbjct 109508 GCGAGCAGTGTTGTTGAAGACACGGAGCATGGGGACGACACCGTTCGAGGTACCGTTAGT 109449 Query 146179 AGAGTTTATTCTGGTGCCGCGGGAGCGCACGCAATGAACATTCACGCCGAGACCGCCGCC 146238 | || || |||| || || | || |||||| || | || | || ||| | Sbjct 109448 GCCGGCAATATAGGAGCCGGTGGCACGGATGCGATGAACGTTGAGACCAATGCCACCGGC 109389 Query 146239 GTACTTGGATATAGCGGCGC-AGTCGCCGAGCGTCTCGTAGATGCCGTCAATGCTATC-- 146295 |||||| || ||||| |||| ||| || |||||||| || ||||| || Sbjct 109388 CATCTTGGAGATCATGGCGCAAGTC-TTGAGGGTGTCGTAGATACCCTCAATAGAGTCCT 109330 Query 146296 GCTTCGAATGCCGAGCAGAAAGCACGAGCACATCTGCGCCATCGGCGTCCCCGCCGAGAA 146355 |||| ||| ||| || ||||| ||| ||| ||| ||| || || || || ||| Sbjct 109329 CCTTC--ATGTCGACGAGGAAGCAAGAGGACAGCTGGGCCTGAGGGGTACCAGCGTTGAA 109272 Query 146356 CAACGTCGGGCTCGCGTGCGTAAACATTTTTCGGCTCATCATCCG---ATACGTTTCGAT 146412 | || || ||||| || || | ||| |||| |||| | || |||||||| Sbjct 109271 GAGTGTGGGAGAAGCGTGGGTGAAGAATTT---GCTCGACATCAGGTTGTAGGTTTCGAT 109215 Query 146413 AGCGTCTTGAATGTCGTCGCCATGAATGCCCAAAGCGACGCGCATGAGCATGTGTTGGGG 146472 || | || |||||| || || || | ||||| ||||||| |||||| ||||| Sbjct 109214 GACGCGCTCAACGTCGTCACCCCAGATACCAACGGCGACACGCATGATCATGTGCTGGGG 109155 Query 146473 CCGCTCCGCCA-CTTGATTGTCAATCTTTAACAAATAGCCGTTCTCCAGGGTTTTGTATC 146531 | ||| || | |||| ||||| ||| | | || |||||| ||| ||| | | Sbjct 109154 TCTCTCGGCAATCTTG-CCGTCAAGCTTGAGGAGGTATGATCTCTCCAAGGTCTTGAAGC 109096 Query 146532 CGAAAAATTTGTA 146544 ||||| ||| ||| Sbjct 109095 CGAAATATTGGTA 109083 >seq120 Length=409222 Score = 131 bits (144), Expect = 2e-25 Identities = 159/217 (73%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||||||||| || || | ||| |||||||| || |||||||| ||| | Sbjct 294141 CCACCACGGAGACGCAGCACCAAGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGAC 294200 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| |||||| |||||||| || ||| |||| || ||||||||||| || || Sbjct 294201 AGGGTGCGGCCGTCCTCAAGCTGCTTACCAGCGAAGATCAAGCGCTGCTGGTCGGGGGGA 294260 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| || || ||| | | || | ||||||| |||||||| Sbjct 294261 ATGCCCTCCTTGTCCTGAATCTTGGACTTCACGTTGTCGATGGTATCGGAGGACTCGACC 294320 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224 || | ||| | ||| || ||||| || || || |||| Sbjct 294321 TCAAGGGTGATGGTCTTGCCGGTAAGCGTCTTGACGA 294357 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || ||||| | || || || | ||| | || || ||||| ||||||||||| ||| | Sbjct 293913 CCTCCGCGGAGGCGAAGGACGAGATGCAGAGTAGATTCCTTCTGAATGTTGTAGTCGGAC 293972 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| |||||| ||||||||||| ||| |||| || ||||||||||| || ||| Sbjct 293973 AGGGTGCGGCCGTCCTCAAGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGGTCGGGGGGG 294032 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || || || || ||| ||||| | || | || || | || |||| Sbjct 294033 ATACCCTCCTTATCTTGAATCTTCGACTTGACGTTGTCGATGGTGTCTGACGATTCGACC 294092 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||||| || || || || || || || ||||| |||||||| Sbjct 294093 TCAAGGGTAATAGTCTTGCCAGTGAGGGTCTTAACGAAGATCTGCAT 294139 Score = 114 bits (126), Expect = 1e-20 Identities = 147/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | || || || || || | ||| |||||||| || |||||||| ||| | Sbjct 294425 CCACCACGAAGGCGGAGAACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCGGAC 294484 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| |||||| |||||||| || ||| |||| || ||||||||||| || || Sbjct 294485 AGGGTGCGGCCGTCCTCAAGCTGCTTACCAGCGAAGATCAAGCGCTGCTGGTCGGGGGGA 294544 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| || || ||| | | || | ||||||| |||||||| Sbjct 294545 ATGCCCTCCTTGTCCTGAATCTTAGACTTCACGTTGTCGATGGTATCGGAGGACTCGACC 294604 Query 131188 TCGACGGTAACGGTTTTACCGGT 131210 || | ||||| ||| || ||||| Sbjct 294605 TCAAGGGTAATGGTCTTGCCGGT 294627 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || || |||| ||| || || | || | ||||||||||| || |||||||| || ||| Sbjct 293685 CCTCCACGCAGACGGAGGACAAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCACTC 293744 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| ||||| | ||||||||| ||| | || | ||||||||| || ||||| Sbjct 293745 AAGGTGCGGCCATCCTCCAACTGCTTGCCAGCGAAAATGAGACGCTGCTGATCGGGAGGA 293804 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| || ||| ||||| | || | || || | ||||||| Sbjct 293805 ATACCCTCCTTGTCCTGAATCTTCGACTTGACGTTGTCAATCGTGTCCGAAGACTCGACC 293864 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | || || ||||| | ||| || ||||| |||||||| Sbjct 293865 TCTAGTGTGATCGTCTTTCCGGTCAAAGTCTTGACGAAGATCTGCAT 293911 >seq456 Length=89672 Score = 120 bits (132), Expect = 3e-22 Identities = 164/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||||| || || || | || |||||||| || |||||||| ||| Sbjct 20955 CCACCACGGAGGCGCAGGACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGGAG 20896 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| |||||| |||||||| || ||| |||| | ||||||||||| || ||| Sbjct 20895 AGGGTGCGGCCGTCCTCGAGCTGCTTTCCAGCGAAGATCAGGCGCTGCTGGTCAGGGGGG 20836 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| || ||||| | || | || |||| ||||| | Sbjct 20835 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCCACC 20776 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATGA 131236 || | ||| | || ||||| || || || || ||||| |||||||||| Sbjct 20775 TCAAGGGTGATAGTCTTACCCGTGAGGGTCTTGACGAAGATCTGCATGA 20727 >seq154 Length=370784 Score = 107 bits (118), Expect = 2e-18 Identities = 133/182 (73%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 131045 CCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGA 131104 |||| || |||||||| ||| | |||||| |||||| ||||||||||| ||| ||| Sbjct 211229 CCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGA 211170 Query 131105 TTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCT 131164 | || ||||||||||| || || || || || ||||| ||| || ||||| | | Sbjct 211169 TCAAGCGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGT 211110 Query 131165 CCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224 | | || || | |||||||| || | ||||| ||| ||||| || || || || |||| Sbjct 211109 CGATCGTGTCCGAGGACTCGACCTCAAGGGTAATGGTCTTACCCGTCAGGGTCTTCACGA 211050 Query 131225 AA 131226 || Sbjct 211049 AA 211048 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472006687434240