Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20incanum_20[genbank_20GCA_5F001855235.1_202016-10-
27] 1,036 sequences; 53,254,579 total letters
Query= NC_009899.1
Length=344691
Score E
Sequences producing significant alignments: (Bits) Value
seq444 84.2 5e-11
>seq444
Length=118335
Score = 84.2 bits (92), Expect = 5e-11
Identities = 136/196 (69%), Gaps = 0/196 (0%)
Strand=Plus/Plus
Query 243530 AGGAATTCATTTGCGACGCTATTCCATGCCGGCTTATTGGCATGAACTCTGAACTCATGG 243589
|||| ||| | ||| ||| | || ||| || | ||||||||||| | || |||
Sbjct 61311 AGGAGTTCCTGACCGAGGCTCTGCCTTGCGCTCTGCTCGGCATGAACTCCAACCTGATGA 61370
Query 243590 GACAGTACATCGAATTCGTAGCCGACCGCATTTTCATCGCGCTTGGTTATGAGAAAGTGT 243649
|||||||| || ||||| || ||||| | || | || ||||| |||| || || |
Sbjct 61371 AGCAGTACATTGAGTTCGTCGCTGACCGTCTCTTGGTTGCTCTTGGCAATGACAAGGTCT 61430
Query 243650 ACAACTCCAAGAACCCCTTTGCCTTTATGGAGCTCATTTCGCTTCAAGGGAAAACTAACT 243709
|||| || || || || | |||||||||| ||| || || || || || ||||
Sbjct 61431 ACAAGTCTTCCAATCCGTTCGACTTTATGGAGAACATCTCTCTGGGCGGCAAGACCAACT 61490
Query 243710 TCTTCGAAAAGCGTGT 243725
|||| || ||||||||
Sbjct 61491 TCTTTGAGAAGCGTGT 61506
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1102865360646600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |