Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20incanum_20[genbank_20GCA_5F001855235.1_202016-10- 27] 1,036 sequences; 53,254,579 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq431 336 2e-87 >seq431 Length=114165 Score = 336 bits (372), Expect = 2e-87 Identities = 1085/1668 (65%), Gaps = 32/1668 (2%) Strand=Plus/Plus Query 93715 AATTACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGC 93774 || ||| | || || | |||||| || |||||| || |||||||||||| | || ||| Sbjct 109080 AACTACCAATATTTCGGCTTCAAGACCTTGGAGAGATCATACCTCCTCAAGCTTGACGGC 109139 Query 93775 AGGGTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCAC 93834 | | || ||||| |||| || || || | ||||| |||||| | || || || || Sbjct 109140 AAGATTGCCGAGAGACCCCAGCACATGATCATGCGTGTCGCCGTTGGTATCTGGGGTGAC 109199 Query 93835 GACATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATACCATGGCC 93894 ||| | | || | | | || ||| | ||| | ||| || Sbjct 109200 GACGTTGAGCGCGTCATCGAAACCTACAACCTGATGTCGAGCAAATTCTTCACCCACGCT 109259 Query 93895 ACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGAT- 93953 | || || || |||||||| || ||||| | | ||| |||| || || ||||| | Sbjct 109260 TCTCCCACACTCTTCAACGCTGGTACCCCTCAGGCCCAGCTGTCCTCTTGCTTCCTCGTC 109319 Query 93954 GACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCAT 94013 ||| | |||| ||||| || || || | ||||| ||||||| || || | || Sbjct 109320 GAC-ATGAAGGAGGACTCTATTGAGGGTATCTACGACACCCTCAAGACTTGCGCCATGAT 109378 Query 94014 CTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTA 94073 ||| || || || || || || ||| || || | | ||||||| || ||||| Sbjct 109379 CTCCAAGATGGCCGGTGGCATTGGTCTCAACGTTCATCGCATCCGTGCCACCGGCTCCTA 109438 Query 94074 CATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAA 94133 || ||| || || || ||||| ||||| ||||||| |||||||| ||||||||||| Sbjct 109439 TATTGCCGGCACTAACGGTACCTCGAACGGTGTCGTCCCCATGCTCCGTGTCTTCAACAA 109498 Query 94134 CGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCT 94193 | | || |||||||| ||||||||||| | | |||| ||||||| |||| || Sbjct 109499 CACTGCTCGCTACGTCGACCAGGGTGGCAACAAACGCCCGGGTGCTTTCGCCATCTACCT 109558 Query 94194 CGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGA 94253 ||||| |||||||| || || | ||| | || ||||| |||||||||||||| || Sbjct 109559 TGAGCCTTGGCACGCCGATGTCTTCGACTTCTTGGATCTGCGCAAGAACCACGGCAAGGA 109618 Query 94254 TCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACG 94313 || | ||| | ||||| ||| |||||||||| | || ||||| || ||||| | Sbjct 109619 GGAGGTTCGTGCCCGTGACCTTTTCCTCGCTCTCTGGATTCCCGACCTCTTCATGAAGAG 109678 Query 94314 CGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGA 94373 || ||||| ||| | ||||| ||| | || ||||| || || || || ||| |||| Sbjct 109679 GGTAGAGAAGAACGGGGACTGGACTCTCATGTGCCCCAACGAGTGCCCTGGCCTGGCCGA 109738 Query 94374 CGTTTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAGGCCAG 94433 | | || | || || | |||||| | ||||| | |||||||| | Sbjct 109739 CTGCTACGGCGAGGAGTTCGAGGCCTTGTACGAGAAGTACGAGCAGATGGGCAAGGGTCG 109798 Query 94434 GAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGGG 94493 ||| ||| | || |||||| ||| || ||| | || | ||| ||||| || Sbjct 109799 CAAGACCATGAAGGCCCAGAAGCTCTGGTATGCCATCCTCGAGGCCCAGACCGAGACTGG 109858 Query 94494 TACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACCTCGG 94553 | || | ||| | | |||||| | | |||| |||| ||||||| || |||| || Sbjct 109859 CAACCCTTTCATGCTCTACAAGGATGCCGCCAACCGCAAGAGCAACCAGAAGAACCTTGG 109918 Query 94554 GGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAGAT 94613 ||| ||||| || || ||||| ||||| ||||||| | || || ||| | Sbjct 109919 CACCATCCGCAGCTCCAACCTCTGCACGGAGATCATCGAGTACTGCGCGCCTGATGAGGT 109978 Query 94614 TGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGAGATGCCTACACGTC 94673 || || || ||||||| ||| || | || |||| || || || ||||| | Sbjct 109979 CGCGGTCTGCAACCTGGCCTCGCTCGCCTTGCCCACCTTTGT------TGACTACA--AC 110030 Query 94674 TACTGCTTCGTTCGATCTGGAGGAGCTTGTGAACTTCGCGGGAAGGATG--GTCTTGAAC 94731 | || || | ||| | || |||| | || | ||| || ||| ||| Sbjct 110031 GAGGGCGTC-TACGACTTCCAGAAGCTCCACGAGGTCAC--CCAGGTTGTTGTCCGCAAC 110087 Query 94732 CTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAACTCAAACCTG 94791 |||||||| | |||||| ||| |||||| || | |||||| ||| ||| || Sbjct 110088 CTGAACAGAATCATCGACGTCAACCACTACCCTGTTCAGGAGGCTCGCAACAGCAACATG 110147 Query 94792 AAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTGATGATGCGT 94851 || || ||||| || |||| ||||||||| | || || || | || |||| Sbjct 110148 CGTCACCGCCCCATTGGTCTCGGTGTCCAGGGTCTTGCTGATGCCTTCCTGGCTCTGCGC 110207 Query 94852 CTGCCCTACGACTCTGTCGACGCGGCGGGTTTGAATTTGAACATATTCGAAAGCATTTAT 94911 |||||| ||| ||| || || | | || ||| || || || | ||| || Sbjct 110208 ATGCCCTTCGAGTCTCCTGAGGCTCGCGACCTAAACAAGAAGATCTTTGAGACCATCTAC 110267 Query 94912 TACGGGGCCATGAAACAATCCGTCCACTTGGCCAGATCGGACGGCGGGCCAC-ACGAATC 94970 ||| ||| | | || || || |||||| ||| || ||||| | || | | Sbjct 110268 CACGCTGCCCTCACCATGTCGGTGCAGCTGGCCA---AGGA-GGAGGGCCCCTACCAGAC 110323 Query 94971 GTTCCGCGGATCGCCCTTGGAACAGGGCATTTTTCAGTTCGACCTCTGGGGTGTGAAGCC 95030 || | || || ||| | |||||||| | |||| |||| | ||| ||| ||||| Sbjct 110324 GTACGAGGGTTCCCCCGTCTCTCAGGGCATCCTCCAGTACGACATGTGGAATGTCAAGCC 110383 Query 95031 CTCGGGTCTGTACGACTGGGAAGCTCT--ACGCGCTGATGTTATCAAACACGGTGTGAAA 95088 ||||| ||| | |||||||| ||| | | | || || | | | |||||||| Sbjct 110384 CTCGGATCTCTGGGACTGGGACGCTTTGAAGGAGCAGA--TCAAGCAGCACGGTGTCCGC 110441 Query 95089 AACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCAACAAC 95148 ||| | || || || || |||||||| || || ||| |||||||| | ||||||||| Sbjct 110442 AACTCTCTTCTCGTCGCGCCCATGCCGACTGCTAGCACCTCGCAGATCTTGGGCAACAAC 110501 Query 95149 GAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGGGAATTC 95208 |||| || || |||| |||||||||| | ||| | | || || || || || || ||| Sbjct 110502 GAGTGCTTTGAGCCCTACACCTCCAACATCTACCAGCGACGTGTTCTTGCTGGTGAGTTC 110561 Query 95209 CCCGTCATCAACAAGCACCTCCTACGGGACC-TGACGTCTCTGGGTGTGTGG---GGTGA 95264 | ||| ||||| ||| | ||||| || || | ||||| ||||| | || Sbjct 110562 CAGGTCGTCAACCCTTGGCTCTTGAAGGACCTTGTCGAC-ATGGGTTTGTGGTCCGATGC 110620 Query 95265 CAAGGTCAAGAACCAACTGCTACGCGCCAACGGCTCCGTCCAGAACATCCCGCAAATACC 95324 || | ||||||| | | || ||||| || ||||||||||||| | || || Sbjct 110621 CA---TGAAGAACCGCATCATTGCCGAGAACGGTTCGATCCAGAACATCCCCAACATCCC 110677 Query 95325 GGAGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAGCG 95372 || ||||||| || |||||||| || ||||| ||| | ||||| Sbjct 110678 TACTGAGGTCAAGGCCCTGTACAAGACTGTTTGGGAAATCTCTCAGCG 110725 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494716793334560