Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20incanum_20[genbank_20GCA_5F001855235.1_202016-10-
27] 1,036 sequences; 53,254,579 total letters
Query= NC_024446.1
Length=306862
Score E
Sequences producing significant alignments: (Bits) Value
seq120 107 4e-18
>seq120
Length=409222
Score = 107 bits (118), Expect = 4e-18
Identities = 161/229 (70%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641
||||||| | | || || || | |||||||||||||| ||||| || || || || |
Sbjct 293911 TACCTCCGCGGAGGCGAAGGACGAGATGCAGAGTAGATTCCTTCTGAATGTTGTAGTCGG 293970
Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701
| || | | ||||| || || || || ||||| ||||| | | || || || || |
Sbjct 293971 ACAGGGTGCGGCCGTCCTCAAGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGGTCGGGGG 294030
Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761
| || || ||||||||||||||||| | || || || || || || || | ||| |
Sbjct 294031 GGATACCCTCCTTATCTTGAATCTTCGACTTGACGTTGTCGATGGTGTCTGACGATTCGA 294090
Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
| || | || || |||||||| || | ||||| || || ||||||||
Sbjct 294091 CCTCAAGGGTAATAGTCTTGCCAGTGAGGGTCTTAACGAAGATCTGCAT 294139
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 981814167471204
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |