Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20lindemuthianum_20[genbank_20GCA_5F001693015.2_20201
7-02-04] 1,857 sequences; 97,411,422 total letters
Query= NC_001650.2
Length=184439
Score E
Sequences producing significant alignments: (Bits) Value
seq147 190 2e-43
>seq147
Length=155241
Score = 190 bits (210), Expect = 2e-43
Identities = 510/773 (66%), Gaps = 64/773 (8%)
Strand=Plus/Minus
Query 145545 CATCTCCATGGGGATGGCCGCGTGGGGGTGGTAGCCCTCCAGCGCAAAGTCCTCCGCCCT 145604
||||| ||||| || | | || |||| |||||| | | ||||||||||| || |
Sbjct 45936 CATCTTCATGGCAATCGTCTTATGCGGGTCGTAGCCTTTGACGACAAAGTCCTCCACCTT 45877
Query 145605 GAAGTCATCTATGTCCTCCACCC-GCCTCA--GG--ATCCTGAGCCTGGGAAAGGGCCGG 145659
| | || ||| || ||||| ||||| || ||| | | ||||||| | |
Sbjct 45876 CCACCCGTCAATG--CTACACCCTGCCTCCTTGGTCATCTCCAACAGGGGAAAGTCTCTG 45819
Query 145660 GGGCTCCTGGTC-AGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTC 145718
|| ||| | || | ||| | |||||| | |||||||||| ||| || |||||||||||
Sbjct 45818 GG-CTCGCGCTCCAACTGCACCTTCAGCGCGTCCACGTGGTCGAGATACACGTGCGCGTC 45760
Query 145719 CCCCAGGACGTGGATGAAGTCCCCGGGCTCGAGGCCCGTGAGGTGGGCGACCATGTAGGT 145778
|||| |||||| | | | || || ||| | | | || | ||| | |||
Sbjct 45759 GCCCATGACGTGTGTCAGGCTTCCTGGAATAAGGTCGCACGCGCGCGCAATCATATGGGT 45700
Query 145779 CAGCAGGGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTG 145838
||||| | ||| ||||| |||||||| ||||| ||||| |||||||| | ||||||||
Sbjct 45699 GAGCAGCGCGTAACTGGCAATGTTGAATGGCACTCCCAGGCCCATGTCACAGGAGCGCTG 45640
Query 145839 GTACAGCTGGCAGGAGAG---------------CTCC-CCGCC----------------- 145865
||||||||||||| | |||| |||||
Sbjct 45639 GTACAGCTGGCAGTGCAAATGTCCCTTCGGCTTCTCCTCCGCCGAGGCGTTTCGCGATCT 45580
Query 145866 ------CGCCACGTAGAACTG-GCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCA 145918
|| ||||| ||||| ||| | | |||||| ||||| || ||||| ||
Sbjct 45579 GGGGTACGAGACGTAAAACTGAGCAAAC-ATGTGGCACGGCGGGAGCGCCATCTTCTTCA 45521
Query 145919 GGTCCGCCGGGTTCCAGGCGGTGAGGACGAGCCTCCTGCTCTCG---GGGTTCCTCTTGA 145975
||||||| |||||||| ||| | || | || ||| || ||| |||||| ||||||
Sbjct 45520 GGTCCGCGGGGTTCCACGCGCTCAGCAGGA---TCCGGCGGTCGTACGGGTTCGTCTTGA 45464
Query 145976 TCTCCCCTATCAGGTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGT 146035
| || | || || ||||| |||||||| ||| || || ||||||| ||
Sbjct 45463 GTTTTTGGATGACCTCGGCCAGTTGGTCAACGCCCTGGCCCGTATAGTCCGTCTTGGCGT 45404
Query 146036 CCACGTACGCGGCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGG 146095
| |||||| |||| || ||||||| ||| ||||| ||||| ||||| || || || |||
Sbjct 45403 CGACGTACTCGGCGCCAAAGTGCCGCCATTGGAAGCCGTACACGGGGCCGAGATCGCCGA 45344
Query 146096 GCTCCCTGTGCCCCAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGA 146155
|| | ||| || ||| | | | |||| || || || || ||||| |||||||||
Sbjct 45343 CTTCGCGGTGGGAAAGGCCGACACTGTCGAGAAACTCGCGCGAGCCGTTTCCGTCCCAGA 45284
Query 146156 TCTTGACGCC--CCTCGCGGAGAGCTCATTGGAGTC--CGTGGACCCCCTGATGAACCAG 146211
|||||| ||| | |||| || | || ||| | |||| ||| || |||||||
Sbjct 45283 TCTTGATGCCGGCGTCGCTCAG-GGGCA---GAGACGACGTGCTGCCCGCGACGAACCAG 45228
Query 146212 AGCAGCTCTTCGAGGACCCCCCTCCAGAAGACCCTCTTGGTGGTCAGCAGGGG 146264
|||||||| ||| ||| | | | |||||| | || ||||| || |||||
Sbjct 45227 AGCAGCTCGGCGACGACGGCGCGCAGGAAGACGCGTTTTGTGGTGAGAAGGGG 45175
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 590063102842280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |