Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20lindemuthianum_20[genbank_20GCA_5F001693015.2_20201
7-02-04] 1,857 sequences; 97,411,422 total letters
Query= NC_005336.1
Length=139962
Score E
Sequences producing significant alignments: (Bits) Value
seq29 82.4 7e-11
>seq29
Length=294672
Score = 82.4 bits (90), Expect = 7e-11
Identities = 123/175 (70%), Gaps = 0/175 (0%)
Strand=Plus/Minus
Query 5315 ATGCGTTCGCATATTAGCTGAGCTATCCTGTCTCCCTTCTTAACCTCAAAGTCGCTGTTT 5374
||||| ||| || ||||| || | | ||| |||| || |||||||||||| |
Sbjct 90724 ATGCGCTCGACGATGAGCTGGGCGACGCGGTCGCCCTCGTTCACCTCAAAGTCGGCATCG 90665
Query 5375 CCGAAGTTAAACAGCACCACCCCGACATTGCCTCGGTAGTCTTCGTCGATAACGCCAGCG 5434
|| ||| ||||||| ||| ||| | ||| |||||||| |||| || || || |||
Sbjct 90664 GCGTGGTTGAACAGCAGAACCTTGACCTGGCCGCGGTAGTCGGCGTCAATGACACCGGCG 90605
Query 5435 CCCACGTCGATAAAGTGTTTGACCGCAAGGCCGGAACGTGGTGCTATGCGTCCGT 5489
|| |||||| |||| ||| || || ||||| || || || ||||| ||||
Sbjct 90604 CCGGTGTCGATGAAGTTCTTGGAGGCGAGACCGGAGCGAGGGGCGATGCGGCCGT 90550
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 447740006593840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |