Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20lindemuthianum_20[genbank_20GCA_5F001693015.2_20201
7-02-04] 1,857 sequences; 97,411,422 total letters
Query= NC_005337.1
Length=134431
Score E
Sequences producing significant alignments: (Bits) Value
seq29 109 5e-19
>seq29
Length=294672
Score = 109 bits (120), Expect = 5e-19
Identities = 128/173 (74%), Gaps = 0/173 (0%)
Strand=Plus/Minus
Query 5581 GCGCTCGCAGATCAGCTGCGCTATTCGGTCGCCCGTCTTTACCTCGAAATCGTTGTGGCC 5640
||||||| ||| ||||| || | ||||||||| || ||||| || ||| | | |
Sbjct 90722 GCGCTCGACGATGAGCTGGGCGACGCGGTCGCCCTCGTTCACCTCAAAGTCGGCATCGGC 90663
Query 5641 GAAGTTGAACAGCACCACGCCCACGTTGCCGCGGTAGTCGGCGTCTATCACGCCCGCGCC 5700
| ||||||||||| || || | |||||||||||||||||| || || || |||||
Sbjct 90662 GTGGTTGAACAGCAGAACCTTGACCTGGCCGCGGTAGTCGGCGTCAATGACACCGGCGCC 90603
Query 5701 CACGTCGATGAAGTGCTTGACCGCCAGGCCGGAGCGGGGAGCCACGCGGCCGT 5753
||||||||||| |||| || || |||||||| || || | ||||||||
Sbjct 90602 GGTGTCGATGAAGTTCTTGGAGGCGAGACCGGAGCGAGGGGCGATGCGGCCGT 90550
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 430044666928184
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |