Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20lindemuthianum_20[genbank_20GCA_5F001693015.2_20201 7-02-04] 1,857 sequences; 97,411,422 total letters Query= NC_005337.1 Length=134431 Score E Sequences producing significant alignments: (Bits) Value seq29 109 5e-19 >seq29 Length=294672 Score = 109 bits (120), Expect = 5e-19 Identities = 128/173 (74%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 5581 GCGCTCGCAGATCAGCTGCGCTATTCGGTCGCCCGTCTTTACCTCGAAATCGTTGTGGCC 5640 ||||||| ||| ||||| || | ||||||||| || ||||| || ||| | | | Sbjct 90722 GCGCTCGACGATGAGCTGGGCGACGCGGTCGCCCTCGTTCACCTCAAAGTCGGCATCGGC 90663 Query 5641 GAAGTTGAACAGCACCACGCCCACGTTGCCGCGGTAGTCGGCGTCTATCACGCCCGCGCC 5700 | ||||||||||| || || | |||||||||||||||||| || || || ||||| Sbjct 90662 GTGGTTGAACAGCAGAACCTTGACCTGGCCGCGGTAGTCGGCGTCAATGACACCGGCGCC 90603 Query 5701 CACGTCGATGAAGTGCTTGACCGCCAGGCCGGAGCGGGGAGCCACGCGGCCGT 5753 ||||||||||| |||| || || |||||||| || || | |||||||| Sbjct 90602 GGTGTCGATGAAGTTCTTGGAGGCGAGACCGGAGCGAGGGGCGATGCGGCCGT 90550 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430044666928184