Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20lindemuthianum_20[genbank_20GCA_5F001693015.2_20201 7-02-04] 1,857 sequences; 97,411,422 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq100 89.7 6e-13 >seq100 Length=183678 Score = 89.7 bits (98), Expect = 6e-13 Identities = 111/152 (73%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 19352 AAAATACCTGAAATAGGTGATAAGTTTGCTTCTTTTACTGCTCAAAAAGGCACATGTGGT 19411 ||||| || |||| |||||||||||||| || | || ||| ||||| ||| |||| Sbjct 20983 AAAATCCCACAAATTGGTGATAAGTTTGCATCACGTCATGGTCAGAAAGGAACAATTGGT 20924 Query 19412 ATGATTTATCGTCAAGAAGATATGCCTTTTACTAAAGATGGTATAGTGCCGGATCTTATT 19471 | | |||||||||||||||||||| || || || ||||| ||||||| | || Sbjct 20923 GTAACATATCGTCAAGAAGATATGCCGTTCACCTGCGAAGGTATCACGCCGGATATCATC 20864 Query 19472 ATTAACCCACATGCTTTTCCAAGTCGAATGAC 19503 || || || || || ||||| ||| ||||| Sbjct 20863 ATCAATCCCCACGCCATTCCATCTCGCATGAC 20832 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595858168321200