Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20lindemuthianum_20[genbank_20GCA_5F001693015.2_20201 7-02-04] 1,857 sequences; 97,411,422 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq147 122 8e-23 >seq147 Length=155241 Score = 122 bits (134), Expect = 8e-23 Identities = 202/292 (69%), Gaps = 0/292 (0%) Strand=Plus/Minus Query 20357 ACATAAAATTGACATAACAAGTGACAGGGCGGAAGCGCCATCAACGACAAGTCCGCCGGG 20416 || ||||| ||| |||| ||| || ||||| ||||||||| | || |||||| ||| Sbjct 45569 ACGTAAAACTGAGCAAACATGTGGCACGGCGGGAGCGCCATCTTCTTCAGGTCCGCGGGG 45510 Query 20417 TTCCACGCACACATAATGATTCTTCTATCGTGCGGATTATTTTTTATTAAATCCACAATG 20476 |||||||| | || | ||| | | |||| ||| || | || | | | | | Sbjct 45509 TTCCACGCGCTCAGCAGGATCCGGCGGTCGTACGGGTTCGTCTTGAGTTTTTGGATGACC 45450 Query 20477 TACGACAATTGGTCAAACCCCTGGCCTGTATAGTCAGCATCCGCGTCCACGTACGCCGCC 20536 | | || |||||||| |||||||| |||||||| | | ||||| |||||| | || Sbjct 45449 TCGGCCAGTTGGTCAACGCCCTGGCCCGTATAGTCCGTCTTGGCGTCGACGTACTCGGCG 45390 Query 20537 CCAAAGTGCCTCCACTGGAAACCGTAAACAGGTCCCAAATCCCCCTCCCTTCTGTGCGCC 20596 |||||||||| ||| ||||| ||||| || || || | ||| || | | ||| | Sbjct 45389 CCAAAGTGCCGCCATTGGAAGCCGTACACGGGGCCGAGATCGCCGACTTCGCGGTGGGAA 45330 Query 20597 AGGCCGCGCCCGGCCAGGAACTCCCTGGAGCCATTTTTGTCCCATATCTTGA 20648 |||||| | | | || ||||| | ||||| ||| |||||| ||||||| Sbjct 45329 AGGCCGACACTGTCGAGAAACTCGCGCGAGCCGTTTCCGTCCCAGATCTTGA 45278 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441362554633880