Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20lindemuthianum_20[genbank_20GCA_5F001693015.2_20201 7-02-04] 1,857 sequences; 97,411,422 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq204 89.7 4e-12 >seq204 Length=130814 Score = 89.7 bits (98), Expect = 4e-12 Identities = 102/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 518168 TTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTA 518227 || ||||||||||| |||| ||||||||| || || || |||| || | | || || Sbjct 21835 TTGTCAAGACCATAGGCAAGAGCAGCAGCGGTAGGCTCGTTAACAACACGGAGGACGTTC 21894 Query 518228 AGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCA 518287 ||||| ||||| || || || || ||||| || | || || ||||| || |||||| Sbjct 21895 AGACCGGCAATCTGACCGGCGTCCTTGGTGGCCTGACGCTGGGAGTCGTTGAAGTATGCA 21954 Query 518288 GGAACAGTAATAACGGC 518304 ||||| |||| |||||| Sbjct 21955 GGAACGGTAACAACGGC 21971 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780730249543042