Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20lindemuthianum_20[genbank_20GCA_5F001693015.2_20201 7-02-04] 1,857 sequences; 97,411,422 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq62 91.5 4e-13 >seq62 Length=227977 Score = 91.5 bits (100), Expect = 4e-13 Identities = 128/180 (71%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 251482 GATGCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCG 251541 || || |||| | ||||| |||||| |||||||| || || | |||||||||||| ||| Sbjct 206563 GAAGCGCCGTAGGCAATCAAACAATCGCGCTCCATCTCTCCCAGACGAAGACCACCGTCG 206622 Query 251542 CGAGCCCTACCCTCGGCAGGCTGACGAGTGAGATTAACCATAGGACCGATGGAGCGGCTA 251601 || | | ||| || | ||||| || |||||| | || |||||| || || Sbjct 206623 CGGGAACGACCTTCCGTGGGCTGGCGCGTGAGAATGGCCCGAGGACCCCGCGAACGTGAG 206682 Query 251602 TGTTGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAATGCGGGACCGATGAAGATG 251661 || ||| || | ||||| || |||||||| |||||| | ||| ||| |||||||| Sbjct 206683 TGCATCTTGTCTTGCACCATGTGTTTGAGACGTTGGTAGTAGATGGGTCCGTTGAAGATG 206742 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471782581319809