Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20lindemuthianum_20[genbank_20GCA_5F001693015.2_20201
7-02-04] 1,857 sequences; 97,411,422 total letters
Query= NC_026268.1
Length=139132
Score E
Sequences producing significant alignments: (Bits) Value
seq653 86.0 6e-12
>seq653
Length=48578
Score = 86.0 bits (94), Expect = 6e-12
Identities = 118/163 (72%), Gaps = 4/163 (2%)
Strand=Plus/Plus
Query 110728 GTTCACGATGACGTCGGCGGCAGCGAAAAAGGCGAGAACGTGTTTAAGAAAGAATCGTTC 110787
||| || || |||| | ||||||||| |||||||| | ||| | ||||| ||
Sbjct 6221 GTTGACAATACCGTCCGAGGCAGCGAAGAAGGCGAGGATGTGAGAGATGAAGAACTTCTC 6280
Query 110788 CTTGTCGTTCAGTTTATTGTTCCAGTCTTCAAAGTCCTTGGACATGTCGATCTCTTCGAC 110847
| |||||| | || || |||||||| | || ||||||||||| ||| ||||| ||| |
Sbjct 6281 GTCGTCGTTAATCTTGTTATTCCAGTCGTGAAGGTCCTTGGACAAGTCAATCTCCTCGGC 6340
Query 110848 CTTCCAG--TGACAATCGACCGCCTTCTTGTACGATTGCCAAA 110888
||||| |||| | | |||||||||||| ||||||||
Sbjct 6341 GGTCCAGAATGAC--GCCTCGGCCTTCTTGTACATTTGCCAAA 6381
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445084068246240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |