Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20lindemuthianum_20[genbank_20GCA_5F001693015.2_20201 7-02-04] 1,857 sequences; 97,411,422 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq147 190 2e-43 >seq147 Length=155241 Score = 190 bits (210), Expect = 2e-43 Identities = 423/638 (66%), Gaps = 54/638 (8%) Strand=Plus/Minus Query 146803 TGCGGGTGGTAGCCCTCGAGGGCAAAATCTTCTGCCCTGAAATCGTCTATGTCCTCCACC 146862 ||||||| |||||| | || | |||| || || || | | |||| ||| || |||| Sbjct 45914 TGCGGGTCGTAGCCTTTGACGACAAAGTCCTCCACCTTCCACCCGTCAATG--CTACACC 45857 Query 146863 C-GCCTCAAA----ATCTTGAGCTTGGGGAAGGGTCGGGGGTTCCTGGCCAGCTGAATTT 146917 | ||||| |||| | | ||| ||| || ||| | | ||| ||| | | Sbjct 45856 CTGCCTCCTTGGTCATCTCCAACAGGGGAAAGTCTCTGGGCTCGCGCTCCAACTGCACCT 45797 Query 146918 TCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCCC 146977 |||| | |||||||||| ||| || ||||||||||| |||| | ||| | | | Sbjct 45796 TCAGCGCGTCCACGTGGTCGAGATACACGTGCGCGTCGCCCATGACGTGTGTCAGGCTTC 45737 Query 146978 CCGGCTTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGT 147037 | || ||||| || | || | || | ||| | ||||||||||| ||| ||||| |||| Sbjct 45736 CTGGAATAAGGTCGCACGCGCGCGCAATCATATGGGTGAGCAGCGCGTAACTGGCAATGT 45677 Query 147038 TGAAGGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGA------ 147091 |||| || || |||||||||||||| | || | ||||||||||||||| | Sbjct 45676 TGAATGGCACTCCCAGGCCCATGTCACAGGAGCGCTGGTACAGCTGGCAGTGCAAATGTC 45617 Query 147092 ------GCTCCCCGTCGGCC---------------------------ACGTAAAACTG-G 147117 ||| | | || ||| ||||||||||| | Sbjct 45616 CCTTCGGCTTCTCCTCCGCCGAGGCGTTTCGCGATCTGGGGTACGAGACGTAAAACTGAG 45557 Query 147118 CACAGGATGTGGCACGGCGGCAGCGCCATGGCGGGCAGGTCCGCGGGGTTCCAGGCCGAG 147177 || | |||||||||||||| |||||||| |||||||||||||||||| || | Sbjct 45556 CAAAC-ATGTGGCACGGCGGGAGCGCCATCTTCTTCAGGTCCGCGGGGTTCCACGC---G 45501 Query 147178 ACCACCAGCCGCCTGCTCTCG---GGGTTCCTCTTAATCTCTTCGATAACCCACCTCAGC 147234 || ||| || || ||| |||||| |||| | | || ||| ||| ||| Sbjct 45500 CTCAGCAGGATCCGGCGGTCGTACGGGTTCGTCTTGAGTTTTTGGATGACCTCGGCCAGT 45441 Query 147235 TGGTCCACGCCCTGGCCCCCGTAGTTTGTCCCGCAGTCCACGTACCTGGCCCCAAAGTGC 147294 ||||| |||||||||||| |||| ||| | ||| |||||| ||| ||||||||| Sbjct 45440 TGGTCAACGCCCTGGCCCGTATAGTCCGTCTTGGCGTCGACGTACTCGGCGCCAAAGTGC 45381 Query 147295 CTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCCGGGCTTTCTGTGCGAGAAGCCCGCC 147354 | ||| |||||||||||||| || || || |||||| | | ||| || | ||| | Sbjct 45380 CGCCATTGGAAGCCGTACACGGGGCCGAGATCGCCGACTTCGCGGTGGGAAAGGCCGACA 45321 Query 147355 CGCTTGAGAAACTCGGGGGACCCGTGGGCGTCCCAGAT 147392 | | |||||||||| | || |||| |||||||||| Sbjct 45320 CTGTCGAGAAACTCGCGCGAGCCGTTTCCGTCCCAGAT 45283 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583474455784800