Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20lindemuthianum_20[genbank_20GCA_5F001693015.2_20201
7-02-04] 1,857 sequences; 97,411,422 total letters
Query= NC_027213.1
Length=214699
Score E
Sequences producing significant alignments: (Bits) Value
seq653 91.5 2e-13
>seq653
Length=48578
Score = 91.5 bits (100), Expect = 2e-13
Identities = 85/108 (79%), Gaps = 0/108 (0%)
Strand=Plus/Plus
Query 39658 TTCGTTAGAAAATGTGAGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGC 39717
||| || || || || || |||||||| ||||||||||| ||||||||||| |||| ||
Sbjct 5811 TTCATTGGAGAAGGTCAGGCCAGGCATGAGACCACGCTTCTTGAGCCAAAAGATGGACGC 5870
Query 39718 AAAAGATCCAGAAAAGAAGATGCCTTCTACTGCTGCAAATGCAACAAG 39765
||| | || || ||||||||||| || || || || || || |||||
Sbjct 5871 AAAGGCACCGGAGAAGAAGATGCCCTCAACAGCAGCGAAGGCGACAAG 5918
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 686892855129480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |