Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20lindemuthianum_20[genbank_20GCA_5F001693025.2_20201
7-02-04] 1,276 sequences; 99,166,722 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq164 91.5 3e-13
>seq164
Length=162670
Score = 91.5 bits (100), Expect = 3e-13
Identities = 111/150 (74%), Gaps = 6/150 (4%)
Strand=Plus/Minus
Query 94407 CTCATATTTCTCGTACAACGCCTTAAACTCTTCGCCATGGACGTCGGAAAGGCCAGGGCA 94466
||| || |||||||||||||||| |||||| ||||| | ||||| ||||| | |||
Sbjct 45514 CTCGTACTTCTCGTACAACGCCTCAAACTCCTCGCCGTAACAGTCGGCGAGGCCGGAGCA 45455
Query 94467 CTCGTGGGGGCACATCAGGGACCAATTCTTCCCAGCCTTC---ACTCTCTCCATGAAGAG 94523
||||| ||| ||||| || | ||| | || |||| ||||||| |||||||||
Sbjct 45454 CTCGTTGGGACACATGAGAGTCCA---GTCACCGTTCTTCTCGACTCTCTTCATGAAGAG 45398
Query 94524 ATCAGATACCCAGATAGCTGGGAAAAGATC 94553
||||| | ||| | || ||||||||||
Sbjct 45397 ATCAGGGATCCAAAGGGCGAGGAAAAGATC 45368
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989567821538580
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |