Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20lindemuthianum_20[genbank_20GCA_5F001693025.2_20201 7-02-04] 1,276 sequences; 99,166,722 total letters Query= NC_005336.1 Length=139962 Score E Sequences producing significant alignments: (Bits) Value seq178 82.4 7e-11 >seq178 Length=419527 Score = 82.4 bits (90), Expect = 7e-11 Identities = 123/175 (70%), Gaps = 0/175 (0%) Strand=Plus/Plus Query 5315 ATGCGTTCGCATATTAGCTGAGCTATCCTGTCTCCCTTCTTAACCTCAAAGTCGCTGTTT 5374 ||||| ||| || ||||| || | | ||| |||| || |||||||||||| | Sbjct 331155 ATGCGCTCGACGATGAGCTGGGCGACGCGGTCGCCCTCGTTCACCTCAAAGTCGGCATCG 331214 Query 5375 CCGAAGTTAAACAGCACCACCCCGACATTGCCTCGGTAGTCTTCGTCGATAACGCCAGCG 5434 || ||| ||||||| ||| ||| | ||| |||||||| |||| || || || ||| Sbjct 331215 GCGTGGTTGAACAGCAGAACCTTGACCTGGCCGCGGTAGTCGGCGTCAATGACACCGGCG 331274 Query 5435 CCCACGTCGATAAAGTGTTTGACCGCAAGGCCGGAACGTGGTGCTATGCGTCCGT 5489 || |||||| |||| ||| || || ||||| || || || ||||| |||| Sbjct 331275 CCGGTGTCGATGAAGTTCTTGGAGGCGAGACCGGAGCGAGGGGCGATGCGGCCGT 331329 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 447743258381120