Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20lindemuthianum_20[genbank_20GCA_5F001693025.2_20201 7-02-04] 1,276 sequences; 99,166,722 total letters Query= NC_005337.1 Length=134431 Score E Sequences producing significant alignments: (Bits) Value seq178 109 5e-19 >seq178 Length=419527 Score = 109 bits (120), Expect = 5e-19 Identities = 128/173 (74%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 5581 GCGCTCGCAGATCAGCTGCGCTATTCGGTCGCCCGTCTTTACCTCGAAATCGTTGTGGCC 5640 ||||||| ||| ||||| || | ||||||||| || ||||| || ||| | | | Sbjct 331157 GCGCTCGACGATGAGCTGGGCGACGCGGTCGCCCTCGTTCACCTCAAAGTCGGCATCGGC 331216 Query 5641 GAAGTTGAACAGCACCACGCCCACGTTGCCGCGGTAGTCGGCGTCTATCACGCCCGCGCC 5700 | ||||||||||| || || | |||||||||||||||||| || || || ||||| Sbjct 331217 GTGGTTGAACAGCAGAACCTTGACCTGGCCGCGGTAGTCGGCGTCAATGACACCGGCGCC 331276 Query 5701 CACGTCGATGAAGTGCTTGACCGCCAGGCCGGAGCGGGGAGCCACGCGGCCGT 5753 ||||||||||| |||| || || |||||||| || || | |||||||| Sbjct 331277 GGTGTCGATGAAGTTCTTGGAGGCGAGACCGGAGCGAGGGGCGATGCGGCCGT 331329 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430047712116512