Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20lindemuthianum_20[genbank_20GCA_5F001693025.2_20201
7-02-04] 1,276 sequences; 99,166,722 total letters
Query= NC_005902.1
Length=186250
Score E
Sequences producing significant alignments: (Bits) Value
seq458 89.7 6e-13
>seq458
Length=245255
Score = 89.7 bits (98), Expect = 6e-13
Identities = 111/152 (73%), Gaps = 0/152 (0%)
Strand=Plus/Plus
Query 19352 AAAATACCTGAAATAGGTGATAAGTTTGCTTCTTTTACTGCTCAAAAAGGCACATGTGGT 19411
||||| || |||| |||||||||||||| || | || ||| ||||| ||| ||||
Sbjct 224193 AAAATCCCACAAATTGGTGATAAGTTTGCATCACGTCATGGTCAGAAAGGAACAATTGGT 224252
Query 19412 ATGATTTATCGTCAAGAAGATATGCCTTTTACTAAAGATGGTATAGTGCCGGATCTTATT 19471
| | |||||||||||||||||||| || || || ||||| ||||||| | ||
Sbjct 224253 GTAACATATCGTCAAGAAGATATGCCGTTCACCTGCGAAGGTATCACGCCGGATATCATC 224312
Query 19472 ATTAACCCACATGCTTTTCCAAGTCGAATGAC 19503
|| || || || || ||||| ||| |||||
Sbjct 224313 ATCAATCCCCACGCCATTCCATCTCGCATGAC 224344
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 595862495841600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |