Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20lindemuthianum_20[genbank_20GCA_5F001693025.2_20201
7-02-04] 1,276 sequences; 99,166,722 total letters
Query= NC_020104.1
Length=1021348
Score E
Sequences producing significant alignments: (Bits) Value
seq245 91.5 1e-12
>seq245
Length=397273
Score = 91.5 bits (100), Expect = 1e-12
Identities = 114/154 (74%), Gaps = 2/154 (1%)
Strand=Plus/Plus
Query 480617 ATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTT 480676
||| |||||||| ||||| || || || ||||| || || ||||||||||| || |||||
Sbjct 356513 ATCCTCAAGTTGTTTTCCGGCGAAGATGAGACGCTGCTGGTCAGGAGGAATACCCTCCTT 356572
Query 480677 GTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAAGGGTAA 480735
||| |||||||| ||||| || || ||||| | | | | | ||| ||||
Sbjct 356573 GTCCTGAATCTTCGACTTGACGTTGTCGATGGTATCCGAAGACTCGACCTCCAA-AGTAA 356631
Query 480736 TAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
| || || ||||| |||||||| |||||||| ||
Sbjct 356632 TGGTCTTGCCGGTCAGAGTCTTGACGAAAATCTG 356665
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3268124466168848
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |